Merge branch 'develop' into update_212_Dec_merge_with_21125_chamges

[jalview.git] / test / jalview / analysis / CrossRefTest.java

diff --git a/test/jalview/analysis/CrossRefTest.java b/test/jalview/analysis/CrossRefTest.java
index 2970e3d..c5f956b 100644 (file)
--- a/test/jalview/analysis/CrossRefTest.java
+++ b/test/jalview/analysis/CrossRefTest.java
@@ -28,6 +28,14 @@ import static org.testng.AssertJUnit.assertNull;
 import static org.testng.AssertJUnit.assertSame;
 import static org.testng.AssertJUnit.assertTrue;
 
+import java.util.ArrayList;
+import java.util.Arrays;
+import java.util.List;
+
+import org.testng.annotations.AfterClass;
+import org.testng.annotations.BeforeClass;
+import org.testng.annotations.Test;
+
 import jalview.datamodel.AlignedCodonFrame;
 import jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping;
 import jalview.datamodel.Alignment;
@@ -41,16 +49,6 @@ import jalview.gui.JvOptionPane;
 import jalview.util.DBRefUtils;
 import jalview.util.MapList;
 import jalview.ws.SequenceFetcher;
-import jalview.ws.SequenceFetcherFactory;
-import jalview.ws.params.InvalidArgumentException;
-
-import java.util.ArrayList;
-import java.util.Arrays;
-import java.util.List;
-
-import org.testng.annotations.AfterClass;
-import org.testng.annotations.BeforeClass;
-import org.testng.annotations.Test;
 
 public class CrossRefTest
 {
@@ -455,7 +453,7 @@ public class CrossRefTest
         return new SequenceI[] { pep1, pep2 };
       }
     };
-    SequenceFetcherFactory.setSequenceFetcher(mockFetcher);
+    SequenceFetcher.setMockFetcher(mockFetcher);
 
     /*
      * find UNIPROT xrefs for nucleotide sequence
@@ -471,7 +469,7 @@ public class CrossRefTest
   @AfterClass(alwaysRun = true)
   public void tearDown()
   {
-    SequenceFetcherFactory.setSequenceFetcher(null);
+    SequenceFetcher.setMockFetcher(null);
   }
 
   /**
@@ -535,7 +533,7 @@ public class CrossRefTest
         return new SequenceI[] { pep1, pep2 };
       }
     };
-    SequenceFetcherFactory.setSequenceFetcher(mockFetcher);
+    SequenceFetcher.setMockFetcher(mockFetcher);
 
     /*
      * find UNIPROT xrefs for gene and transcripts
@@ -698,7 +696,7 @@ public class CrossRefTest
         }
       }
     };
-    SequenceFetcherFactory.setSequenceFetcher(mockFetcher);
+    SequenceFetcher.setMockFetcher(mockFetcher);
 
     /*
      * find EMBL xrefs for Uniprot seqs and verify that