Merge branch 'develop' into patch/JAL-4281_idwidthandannotHeight_in_project

[jalview.git] / test / jalview / bin / commandsTest2.argfile1

diff --git a/test/jalview/bin/commandsTest2.argfile1 b/test/jalview/bin/commandsTest2.argfile1
index ea3a1be..85eccd9 100644 (file)
--- a/test/jalview/bin/commandsTest2.argfile1
+++ b/test/jalview/bin/commandsTest2.argfile1
@@ -1,9 +1,8 @@
---substitutions
 --append=examples/test_fab41.result/sample.a2m
 --showannotations
 --showssannotations
 --colour=gecos-flower
---structure=[viewer=jmol,tempfac=plddt,paematrix={dirname}/test_fab41_unrelaxed_rank_1_model_3_scores.json]{dirname}/test_fab41_unrelaxed_rank_1_model_3.pdb
+--structure=[structureviewer=jmol,tempfac=plddt,paematrix={dirname}/test_fab41_unrelaxed_rank_1_model_3_scores.json]{dirname}/test_fab41_unrelaxed_rank_1_model_3.pdb
 --structure={dirname}/test_fab41_unrelaxed_rank_2_model_4.pdb
 --structureviewer=jmol
 --paematrix={dirname}/test_fab41_unrelaxed_rank_2_model_4_scores.json
@@ -12,7 +11,7 @@
 --structureviewer=jmol
 --paematrix={dirname}/test_fab41_unrelaxed_rank_3_model_2_scores.json
 --tempfac=plddt
---structure=[viewer=none]{dirname}/test_fab41_unrelaxed_rank_4_model_5.pdb
+--structure=[structureviewer=none]{dirname}/test_fab41_unrelaxed_rank_4_model_5.pdb
 --paematrix={dirname}/test_fab41_unrelaxed_rank_4_model_5_scores.json
 --tempfac=plddt
 --structure={dirname}/test_fab41_unrelaxed_rank_5_model_1.pdb