Merge branch 'develop' into releases/Release_2_10_3_Branch

[jalview.git] / test / jalview / ext / ensembl / EnsemblGeneTest.java

diff --git a/test/jalview/ext/ensembl/EnsemblGeneTest.java b/test/jalview/ext/ensembl/EnsemblGeneTest.java
index 5920b89..1b1a2b4 100644 (file)
--- a/test/jalview/ext/ensembl/EnsemblGeneTest.java
+++ b/test/jalview/ext/ensembl/EnsemblGeneTest.java
@@ -173,7 +173,8 @@ public class EnsemblGeneTest
     // NMD_transcript_variant treated like transcript in Ensembl
     SequenceFeature sf3 = new SequenceFeature("NMD_transcript_variant", "",
             22000, 22500, 0f, null);
-    sf3.setValue("Parent", "gene:" + geneId);
+    // id matching should not be case-sensitive
+    sf3.setValue("Parent", "gene:" + geneId.toLowerCase());
     sf3.setValue("transcript_id", "transcript3");
     genomic.addSequenceFeature(sf3);
 
@@ -259,6 +260,9 @@ public class EnsemblGeneTest
     sf.setValue("ID", "gene:" + accId);
     assertTrue(testee.identifiesSequence(sf, accId));
 
+    // test is not case-sensitive
+    assertTrue(testee.identifiesSequence(sf, accId.toLowerCase()));
+
     // transcript not valid:
     sf = new SequenceFeature("transcript", "", 1, 2, 0f, null);
     sf.setValue("ID", "gene:" + accId);