JAL-3076 fetch Ensembl sequence as JSON instead of Fasta

[jalview.git] / test / jalview / ext / ensembl / EnsemblRestClientTest.java

diff --git a/test/jalview/ext/ensembl/EnsemblRestClientTest.java b/test/jalview/ext/ensembl/EnsemblRestClientTest.java
index c7b3397..460d16c 100644 (file)
--- a/test/jalview/ext/ensembl/EnsemblRestClientTest.java
+++ b/test/jalview/ext/ensembl/EnsemblRestClientTest.java
@@ -1,69 +1,93 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.ext.ensembl;
 
+import static org.testng.Assert.assertTrue;
+
 import jalview.datamodel.AlignmentI;
 
 import java.net.MalformedURLException;
 import java.net.URL;
 import java.util.List;
 
+import org.testng.annotations.BeforeMethod;
 import org.testng.annotations.Test;
 
 public class EnsemblRestClientTest
 {
+  private EnsemblRestClient sf;
 
   @Test(suiteName = "live")
-  public void testLiveCheckEnsembl()
+  public void testIsEnsemblAvailable()
   {
-    EnsemblRestClient sf = new EnsemblRestClient()
+    boolean isAvailable = sf.isEnsemblAvailable();
+    if (isAvailable)
+    {
+      System.out.println("Ensembl is UP!");
+    }
+    else
     {
-  
+      System.err
+              .println("Ensembl is DOWN or unreachable ******************* BAD!");
+    }
+  }
+
+  @BeforeMethod(alwaysRun = true)
+  protected void setUp()
+  {
+    sf = new EnsemblRestClient()
+    {
+
       @Override
       public String getDbName()
       {
         return null;
       }
-  
+
       @Override
       public AlignmentI getSequenceRecords(String queries) throws Exception
       {
         return null;
       }
-  
+
       @Override
       protected URL getUrl(List<String> ids) throws MalformedURLException
       {
         return null;
       }
-  
+
       @Override
       protected boolean useGetRequest()
       {
         return false;
       }
-  
-      @Override
-      protected String getRequestMimeType()
-      {
-        return null;
-      }
-  
-      @Override
-      protected String getResponseMimeType()
-      {
-        return null;
-      }
-  
     };
-    boolean isAvailable = sf.isEnsemblAvailable();
-    if (isAvailable)
-    {
-      System.out.println("Ensembl is UP!");
-    }
-    else
+  }
+
+  @Test(groups = "Network")
+  public void testCheckEnsembl_overload()
+  {
+    for (int i = 0; i < 20; i++)
     {
-      System.err
-              .println("Ensembl is DOWN or unreachable ******************* BAD!");
+      assertTrue(sf.checkEnsembl(), "Error on " + (i + 1) + "th ping");
     }
   }
-
 }