JAL-3210 Barebones gradle/buildship/eclipse. See README

[jalview.git] / test / jalview / gui / SequenceRendererTest.java

diff --git a/test/jalview/gui/SequenceRendererTest.java b/test/jalview/gui/SequenceRendererTest.java
deleted file mode 100644 (file)
index 359377a..0000000
--- a/test/jalview/gui/SequenceRendererTest.java
+++ /dev/null
@@ -1,89 +0,0 @@
-/*
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
- * 
- * This file is part of Jalview.
- * 
- * Jalview is free software: you can redistribute it and/or
- * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3
- * of the License, or (at your option) any later version.
- *  
- * Jalview is distributed in the hope that it will be useful, but 
- * WITHOUT ANY WARRANTY; without even the implied warranty 
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
- * PURPOSE.  See the GNU General Public License for more details.
- * 
- * You should have received a copy of the GNU General Public License
- * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
- * The Jalview Authors are detailed in the 'AUTHORS' file.
- */
-package jalview.gui;
-
-import static org.testng.Assert.assertEquals;
-
-import jalview.bin.Jalview;
-import jalview.datamodel.Alignment;
-import jalview.datamodel.AlignmentI;
-import jalview.datamodel.Sequence;
-import jalview.datamodel.SequenceGroup;
-import jalview.datamodel.SequenceI;
-import jalview.renderer.ResidueShader;
-import jalview.renderer.ResidueShaderI;
-import jalview.schemes.ZappoColourScheme;
-
-import java.awt.Color;
-
-import org.testng.annotations.BeforeClass;
-import org.testng.annotations.BeforeMethod;
-import org.testng.annotations.Test;
-
-public class SequenceRendererTest
-{
-  AlignmentI al;
-  AlignViewport av;
-
-  SequenceI seq1;
-
-  @BeforeClass(alwaysRun = true)
-  public static void setUpBeforeClass() throws Exception
-  {
-    Jalview.main(
-            new String[]
-    { "-nonews", "-props", "test/jalview/testProps.jvprops" });
-  }
-
-  @BeforeMethod(alwaysRun = true)
-  public void setUp()
-  {
-    seq1 = new Sequence("Seq1", "ABCEEEABCABC");
-    SequenceI seq2 = new Sequence("Seq2", "ABCABCABCABC");
-    SequenceI seq3 = new Sequence("Seq3", "ABCABCABCABC");
-    SequenceI[] seqs = new SequenceI[] { seq1, seq2, seq3 };
-    al = new Alignment(seqs);
-    al.setDataset(null);
-    av = new AlignViewport(al);
-  }
-
-  @Test(groups = "Functional")
-  public void testGetResidueColour_WithGroup()
-  {
-    SequenceRenderer sr = new SequenceRenderer(av);
-    SequenceGroup sg = new SequenceGroup();
-    sg.addSequence(seq1, false);
-    sg.setStartRes(3);
-    sg.setEndRes(5);
-
-    ResidueShaderI rs = new ResidueShader();
-    rs.setColourScheme(new ZappoColourScheme());
-    sg.setGroupColourScheme(rs);
-
-    av.getAlignment().addGroup(sg);
-
-    // outside group residues are white
-    assertEquals(Color.white, sr.getResidueColour(seq1, 1, null));
-
-    // within group use Zappo scheme - E = red
-    assertEquals(Color.red, sr.getResidueColour(seq1, 3, null));
-  }
-}