JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensing glob
[jalview.git] / test / jalview / io / IdentifyFileTest.java
index 1c34e1f..fbecc00 100644 (file)
@@ -1,13 +1,33 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
+ * Copyright (C) 2015 The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.io;
 
 import org.testng.Assert;
 import org.testng.annotations.DataProvider;
 import org.testng.annotations.Test;
 
-public class IdentifyFileTest {
+public class IdentifyFileTest
+{
 
-  @Test(groups =
-  { "Functional" }, dataProvider = "identifyFiles")
+  @Test(groups = { "Functional" }, dataProvider = "identifyFiles")
   public void Identify(String data, String expectedFileType)
   {
     String protocol = AppletFormatAdapter.FILE;
@@ -20,23 +40,26 @@ public class IdentifyFileTest {
   @DataProvider(name = "identifyFiles")
   public Object[][] IdentifyFileDP()
   {
-    return new Object[][]
-    {
-    { "examples/example.json", "JSON" },
-    { "examples/plantfdx.fa", "FASTA" },
-    { "examples/dna_interleaved.phy", "PHYLIP" },
-    { "examples/2GIS.pdb", "PDB" },
-    { "examples/rf00031_folded.stk", "STH" },
-    { "examples/testdata/test.rnaml", "RNAML" },
-    { "examples/testdata/test.aln", "CLUSTAL" },
-    { "examples/testdata/test.pfam", "PFAM" },
-    { "examples/testdata/test.msf", "MSF" },
-    { "examples/testdata/test.pir", "PIR" },
-    { "examples/testdata/test.html", "HTML" },
-    { "examples/testdata/test.pileup", "PileUp" },
-    { "examples/testdata/test.blc", "BLC" },
-    { "examples/testdata/simplegff3.gff", "GFF v2 or v3" },
-    { "examples/testdata/test.jvp", "Jalview" },
+    return new Object[][] {
+        { "examples/example.json", "JSON" },
+        { "examples/plantfdx.fa", "FASTA" },
+        { "examples/dna_interleaved.phy", "PHYLIP" },
+        { "examples/2GIS.pdb", "PDB" },
+        { "examples/rf00031_folded.stk", "STH" },
+        { "examples/testdata/test.rnaml", "RNAML" },
+        { "examples/testdata/test.aln", "CLUSTAL" },
+        { "examples/testdata/test.pfam", "PFAM" },
+        { "examples/testdata/test.msf", "MSF" },
+        { "examples/testdata/test.pir", "PIR" },
+        { "examples/testdata/test.html", "HTML" },
+        { "examples/testdata/test.pileup", "PileUp" },
+        { "examples/testdata/test.blc", "BLC" },
+        { "examples/testdata/simplegff3.gff", "GFF v2 or v3" },
+        { "examples/testdata/test.jvp", "Jalview" },
+        {
+            "examples/testdata/cullpdb_pc25_res3.0_R0.3_d150729_chains9361.fasta.15316",
+            "FASTA" },
+
     // { "examples/testdata/test.amsa", "AMSA" },
     // { "examples/test.jnet", "JnetFile" },
     };