JAL-1270 JAL-2416 JAL-2839 set alwaysRun=true in test AfterMethod!

[jalview.git] / test / jalview / io / ScoreMatrixFileTest.java

diff --git a/test/jalview/io/ScoreMatrixFileTest.java b/test/jalview/io/ScoreMatrixFileTest.java
index 1aa191a..254feaa 100644 (file)
--- a/test/jalview/io/ScoreMatrixFileTest.java
+++ b/test/jalview/io/ScoreMatrixFileTest.java
@@ -13,11 +13,18 @@ import jalview.analysis.scoremodels.ScoreModels;
 import java.io.IOException;
 import java.net.MalformedURLException;
 
+import org.testng.annotations.AfterMethod;
 import org.testng.annotations.Test;
 
 public class ScoreMatrixFileTest
 {
 
+  @AfterMethod(alwaysRun=true)
+  public void tearDownAfterTest()
+  {
+    ScoreModels.getInstance().reset();
+  }
+
   /**
    * Test a successful parse of a (small) score matrix file
    * 
@@ -484,7 +491,7 @@ public class ScoreMatrixFileTest
   public void testParse_ncbiFormat() throws MalformedURLException,
           IOException
   {
-    assertNull(ScoreModels.getInstance().forName("MyNewTest"));
+    assertNull(ScoreModels.getInstance().getScoreModel("MyNewTest", null));
 
     String data = "ScoreMatrix MyNewTest\n" + "\tA\tB\tC\n"
             + "A\t1.0\t2.0\t3.0\n" + "B\t4.0\t5.0\t6.0\n"
@@ -494,8 +501,8 @@ public class ScoreMatrixFileTest
 
     parser.parse();
   
-    ScoreMatrix sm = (ScoreMatrix) ScoreModels.getInstance().forName(
-            "MyNewTest");
+    ScoreMatrix sm = (ScoreMatrix) ScoreModels.getInstance().getScoreModel(
+            "MyNewTest", null);
     assertNotNull(sm);
     assertEquals(sm.getName(), "MyNewTest");
     assertEquals(parser.getMatrixName(), "MyNewTest");