JAL-1805 test envirionment separation

[jalview.git] / test / jalview / io / TCoffeeScoreFileTest.java

diff --git a/test/jalview/io/TCoffeeScoreFileTest.java b/test/jalview/io/TCoffeeScoreFileTest.java
index b7da5e4..7911188 100644 (file)
--- a/test/jalview/io/TCoffeeScoreFileTest.java
+++ b/test/jalview/io/TCoffeeScoreFileTest.java
@@ -40,7 +40,7 @@ public class TCoffeeScoreFileTest
   final static File ALIGN_FILE = new File(
           "test/jalview/io/tcoffee.fasta_aln");
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void testReadHeader() throws IOException
   {
 
@@ -65,7 +65,7 @@ public class TCoffeeScoreFileTest
     AssertJUnit.assertEquals(90, header.getScoreFor("cons"));
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void testWrongFile()
   {
     try
@@ -80,7 +80,7 @@ public class TCoffeeScoreFileTest
     }
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void testHeightAndWidth() throws IOException
   {
     TCoffeeScoreFile result = new TCoffeeScoreFile(SCORE_FILE.getPath(),
@@ -90,7 +90,7 @@ public class TCoffeeScoreFileTest
     AssertJUnit.assertEquals(83, result.getWidth());
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void testReadBlock() throws IOException
   {
 
@@ -129,7 +129,7 @@ public class TCoffeeScoreFileTest
             block.getConsensus());
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void testParse() throws IOException
   {
 
@@ -165,7 +165,7 @@ public class TCoffeeScoreFileTest
             parser.getScoresFor("cons"));
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void testGetAsList() throws IOException
   {
 
@@ -203,7 +203,7 @@ public class TCoffeeScoreFileTest
 
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void testGetAsArray() throws IOException
   {
 
@@ -234,7 +234,7 @@ public class TCoffeeScoreFileTest
 
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void testHeightAndWidthWithResidueNumbers() throws Exception
   {
     String file = "test/jalview/io/tcoffee.score_ascii_with_residue_numbers";