file format enum wip changes

[jalview.git] / test / jalview / io / gff / GffTests.java

diff --git a/test/jalview/io/gff/GffTests.java b/test/jalview/io/gff/GffTests.java
index 2ee4eac..72ea7e2 100644 (file)
--- a/test/jalview/io/gff/GffTests.java
+++ b/test/jalview/io/gff/GffTests.java
@@ -13,8 +13,8 @@ import jalview.datamodel.Sequence;
 import jalview.datamodel.SequenceDummy;
 import jalview.datamodel.SequenceI;
 import jalview.gui.AlignFrame;
+import jalview.io.DataSourceType;
 import jalview.io.FileLoader;
-import jalview.io.FormatAdapter;
 
 import java.util.List;
 
@@ -37,7 +37,7 @@ public class GffTests
   {
     String proteinSeq = ">prot1/10-16\nYCWRSGA";
     AlignFrame af = new FileLoader(false).LoadFileWaitTillLoaded(
-            proteinSeq, FormatAdapter.PASTE);
+            proteinSeq, DataSourceType.PASTE);
 
     /*
      * exonerate GFF output mapping residues 11-15 (CWRSG) 
@@ -45,7 +45,7 @@ public class GffTests
      */
     String exonerateGff = "##gff-version 2\n"
             + "prot1\tprotein2genome\tsimilarity\t11\t15\t99\t-\t.\talignment_id 0 ; Target dna1 ; Align 11 24 5";
-    af.loadJalviewDataFile(exonerateGff, FormatAdapter.PASTE, null, null);
+    af.loadJalviewDataFile(exonerateGff, DataSourceType.PASTE, null, null);
 
     /*
      * check we have a mapping from prot1 to SequenceDummy 'dna1'