JAL-3855 auto select clusters and fix up colouring/propagation on calculation & tree...
[jalview.git] / test / jalview / project / Jalview2xmlTests.java
index 6518693..c9532cc 100644 (file)
@@ -1574,7 +1574,7 @@ public class Jalview2xmlTests extends Jalview2xmlBase
             sq.getLength(), sq.getLength());
     assertEquals(vals[3][4], paevals[3][4]);
     assertEquals(vals[4][3], paevals[4][3]);
-    dummyMat.setGroupSet(GroupSet.makeGroups(dummyMat, 0.5f, false));
+    dummyMat.setGroupSet(GroupSet.makeGroups(dummyMat, false,0.5f, false));
     Assert.assertNotSame(dummyMat.getNewick(), "");
     AlignmentAnnotation paeCm = sq.addContactList(dummyMat);
     al.addAnnotation(paeCm);