af = new FileLoader().LoadFileWaitTillLoaded(tfile,
DataSourceType.FILE);
assertNotNull(af, "Failed to import new project");
- assertSame(viewport.getGlobalColourScheme().getClass(),
+ assertSame(af.getViewport().getGlobalColourScheme().getClass(),
TCoffeeColourScheme.class,
"Didn't set T-coffee colourscheme for imported project.");
System.out.println(
/*
* Colour alignment by Buried Index, Above 10% PID, By Conservation 20%
*/
+ av.setColourAppliesToAllGroups(false);
af.changeColour_actionPerformed(JalviewColourScheme.Buried.toString());
assertTrue(av.getGlobalColourScheme() instanceof BuriedColourScheme);
af.abovePIDThreshold_actionPerformed(true);