JAL-966 JAL-1738 JAL-345 interfaces for SearchResults and SearchResults.Match

[jalview.git] / test / jalview / util / MappingUtilsTest.java

diff --git a/test/jalview/util/MappingUtilsTest.java b/test/jalview/util/MappingUtilsTest.java
index 655aa2a..6d04661 100644 (file)
--- a/test/jalview/util/MappingUtilsTest.java
+++ b/test/jalview/util/MappingUtilsTest.java
@@ -33,8 +33,8 @@ import jalview.datamodel.AlignedCodonFrame;
 import jalview.datamodel.Alignment;
 import jalview.datamodel.AlignmentI;
 import jalview.datamodel.ColumnSelection;
-import jalview.datamodel.SearchResults;
-import jalview.datamodel.SearchResults.Match;
+import jalview.datamodel.SearchResultMatchI;
+import jalview.datamodel.SearchResultsI;
 import jalview.datamodel.Sequence;
 import jalview.datamodel.SequenceGroup;
 import jalview.datamodel.SequenceI;
@@ -81,9 +81,9 @@ public class MappingUtilsTest
     /*
      * Check protein residue 12 maps to codon 5-7, 13 to codon 8-10
      */
-    SearchResults sr = MappingUtils.buildSearchResults(aseq1, 12, acfList);
+    SearchResultsI sr = MappingUtils.buildSearchResults(aseq1, 12, acfList);
     assertEquals(1, sr.getResults().size());
-    Match m = sr.getResults().get(0);
+    SearchResultMatchI m = sr.getResults().get(0);
     assertEquals(seq1.getDatasetSequence(), m.getSequence());
     assertEquals(5, m.getStart());
     assertEquals(7, m.getEnd());
@@ -134,9 +134,9 @@ public class MappingUtilsTest
     /*
      * Check protein residue 8 maps to [6, 8, 9]
      */
-    SearchResults sr = MappingUtils.buildSearchResults(aseq1, 8, acfList);
+    SearchResultsI sr = MappingUtils.buildSearchResults(aseq1, 8, acfList);
     assertEquals(2, sr.getResults().size());
-    Match m = sr.getResults().get(0);
+    SearchResultMatchI m = sr.getResults().get(0);
     assertEquals(seq1.getDatasetSequence(), m.getSequence());
     assertEquals(6, m.getStart());
     assertEquals(6, m.getEnd());