JAL-2360 ColourSchemes holds configured schemes, AlignFrame colour menu
authorgmungoc <g.m.carstairs@dundee.ac.uk>
Tue, 20 Dec 2016 14:06:42 +0000 (14:06 +0000)
committergmungoc <g.m.carstairs@dundee.ac.uk>
Tue, 20 Dec 2016 14:06:42 +0000 (14:06 +0000)
commit94379c810f9115b8564ee7bac46ed119218d5fd2
treeb6d24684191fe555e88773af8bd2a00896e76f2c
parent8e2d11189e14700f721dc0cf17c462352883ef97
JAL-2360 ColourSchemes holds configured schemes, AlignFrame colour menu
construction and actions done dynamically
45 files changed:
resources/lang/Messages.properties
resources/lang/Messages_es.properties
src/MCview/AppletPDBViewer.java
src/MCview/PDBViewer.java
src/jalview/appletgui/APopupMenu.java
src/jalview/appletgui/AlignFrame.java
src/jalview/appletgui/AppletJmol.java
src/jalview/gui/AlignFrame.java
src/jalview/gui/PopupMenu.java
src/jalview/gui/Preferences.java
src/jalview/gui/UserDefinedColours.java
src/jalview/jbgui/GAlignFrame.java
src/jalview/jbgui/GStructureViewer.java
src/jalview/schemes/AnnotationColourGradient.java
src/jalview/schemes/Blosum62ColourScheme.java
src/jalview/schemes/BuriedColourScheme.java
src/jalview/schemes/ClustalxColourScheme.java
src/jalview/schemes/ColourSchemeI.java
src/jalview/schemes/ColourSchemeProperty.java
src/jalview/schemes/ColourSchemes.java [new file with mode: 0644]
src/jalview/schemes/CovariationColourScheme.java
src/jalview/schemes/FollowerColourScheme.java
src/jalview/schemes/HelixColourScheme.java
src/jalview/schemes/HydrophobicColourScheme.java
src/jalview/schemes/JalviewColourScheme.java
src/jalview/schemes/NucleotideColourScheme.java
src/jalview/schemes/PIDColourScheme.java
src/jalview/schemes/PurinePyrimidineColourScheme.java
src/jalview/schemes/RNAHelicesColour.java
src/jalview/schemes/RNAHelicesColourChooser.java
src/jalview/schemes/RNAInteractionColourScheme.java
src/jalview/schemes/ResidueColourScheme.java
src/jalview/schemes/ScoreColourScheme.java
src/jalview/schemes/StrandColourScheme.java
src/jalview/schemes/TCoffeeColourScheme.java
src/jalview/schemes/TaylorColourScheme.java
src/jalview/schemes/TurnColourScheme.java
src/jalview/schemes/UserColourScheme.java
src/jalview/schemes/ZappoColourScheme.java
src/jalview/viewmodel/AlignmentViewport.java
test/jalview/io/Jalview2xmlTests.java
test/jalview/schemes/ColourSchemePropertyTest.java
test/jalview/schemes/ColourSchemesTest.java [new file with mode: 0644]
test/jalview/schemes/JalviewColourSchemeTest.java
test/jalview/schemes/ResidueColourSchemeTest.java