mistakenly uploaded test version
authorhansonr <hansonr@STO24954W.ad.stolaf.edu>
Tue, 1 Oct 2019 09:57:25 +0000 (11:57 +0200)
committerhansonr <hansonr@STO24954W.ad.stolaf.edu>
Tue, 1 Oct 2019 09:57:25 +0000 (11:57 +0200)
src/jalview/io/FileFormat.java
src/jalview/io/IdentifyFile.java

index df76c61..cb61740 100644 (file)
@@ -29,21 +29,6 @@ import java.io.IOException;
 
 public enum FileFormat implements FileFormatI
 {
-  BSML("BSML", "bbb", true, false)
-  {
-    @Override
-    public AlignmentFileReaderI getReader(FileParse source)
-            throws IOException
-    {
-      return new BSMLFile(source);
-    }
-
-    @Override
-    public AlignmentFileWriterI getWriter(AlignmentI al)
-    {
-      return null;
-    }
-  },
   Fasta("Fasta", "fa, fasta, mfa, fastq", true, true)
   {
     @Override
index fc9938f..621cfac 100755 (executable)
@@ -179,15 +179,6 @@ public class IdentifyFile
             break;
           }
         }
-        if (data.startsWith("<?xml"))
-        {
-          data = source.nextLine();
-          if (data.startsWith("<Bsml>"))
-          {
-            reply = FileFormat.BSML;
-            break;
-          }
-        }
         data = data.toUpperCase();
 
         if (data.startsWith(ScoreMatrixFile.SCOREMATRIX))