Enable lower case colours

diff --git a/src/jalview/gui/UserDefinedColours.java b/src/jalview/gui/UserDefinedColours.java
index 86c39f9..a8afd43 100755 (executable)
--- a/src/jalview/gui/UserDefinedColours.java
+++ b/src/jalview/gui/UserDefinedColours.java
@@ -67,10 +67,6 @@ public class UserDefinedColours extends GUserDefinedColours
     {\r
         super();\r
 \r
-        //AW - LOWER CASE DISABLED IN 2.1.01 bug fix release\r
-        casePanel.setVisible(false);\r
-\r
-\r
         lcaseColour.setEnabled(false);\r
 \r
         this.ap = ap;\r
@@ -137,9 +133,6 @@ public class UserDefinedColours extends GUserDefinedColours
 \r
     void resetButtonPanel(boolean caseSensitive)\r
     {\r
-      //AW - LOWER CASE DISABLED IN 2.1.01 bug fix release\r
-      caseSensitive = false;\r
-\r
       buttonPanel.removeAll();\r
 \r
 \r
@@ -356,12 +349,10 @@ public class UserDefinedColours extends GUserDefinedColours
           {    }\r
         }\r
 \r
-      /* //AW - LOWER CASE DISABLED IN 2.1.01 bug fix release\r
         if(caseSensitive.isSelected())\r
           button.setMargin(new java.awt.Insets(2,2,2,2));\r
         else\r
          button.setMargin(new java.awt.Insets(2,14,2,14));\r
-      */\r
 \r
         button.setBackground(col);\r
         button.setText(label);\r

diff --git a/src/jalview/schemes/UserColourScheme.java b/src/jalview/schemes/UserColourScheme.java
index 007d358..3349283 100755 (executable)
--- a/src/jalview/schemes/UserColourScheme.java
+++ b/src/jalview/schemes/UserColourScheme.java
@@ -152,8 +152,6 @@ public class UserColourScheme
 \r
           int colIndex = ResidueProperties.aaIndex[token.charAt(0)];\r
 \r
-           //AW - LOWER CASE DISABLED IN 2.1.01 bug fix release\r
-\r
           if(token.equalsIgnoreCase("lowerCase"))\r
           {\r
             if (lowerCaseColours == null)\r
@@ -194,7 +192,6 @@ public class UserColourScheme
 \r
       if ((threshold == 0) || aboveThreshold(ResidueProperties.aa[index], j))\r
       {\r
-       //AW - LOWER CASE DISABLED IN 2.1.01 bug fix release\r
         if(lowerCaseColours!=null && 'a' <= s.charAt(0) && s.charAt(0) <= 'z')\r
           currentColour = lowerCaseColours[index];\r
         else\r