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Merge branch 'releases/Release_2_11_3_Branch'
[jalview.git] / src / jalview / appletgui /
2023-11-03 James ProcterJAL-4090 JAL-1551 spotlessApply tree | commitdiff
2023-09-06 James ProcterJAL-4259 construct a new SequenceRenderer when renderin... tree | commitdiff
2023-08-10 Ben SoaresJAL-629 Change all stdout and stderr output to use... tree | commitdiff
2023-05-26 James ProcterMerge branch 'develop' into features/JAL-4134_use_annot... tree | commitdiff
2023-05-22 Ben SoaresJAL-629 --structureimage with formatting args. tree | commitdiff
2023-05-22 James ProcterJAL-1551 spotless tree | commitdiff
2023-05-19 James ProcterJAL-1551 spotlessApply tree | commitdiff
2023-05-19 James ProcterJAL-1551 spotlessApply tree | commitdiff
2023-02-23 James ProcterJAL-4134 - brutal hack to build a tree clustering colum... tree | commitdiff
2023-02-23 James ProcterJAL-4134 - refactor tree calculation code to work with... tree | commitdiff
2023-02-03 James ProcterJAL-1551 remove temp file in src tree | commitdiff
2022-10-29 Jim ProcterMerge branch 'features/JAL-4061_and_JAL-4062_findselect... tree | commitdiff
2022-10-20 Jim ProcterJAL-2349 JAL-3855 experimenting with filtering columns... tree | commitdiff
2022-09-14 Jim ProcterJAL-4061 JAL-4062 button in Find dialog to copy highlig... tree | commitdiff
2022-09-14 Jim ProcterJAL-4061 JAL-4062 Find can now search features tree | commitdiff
2022-06-10 Jim ProcterMerge branch 'features/r2_11_2_alphafold/JAL-2349_JAL... tree | commitdiff
2022-03-08 Jim ProcterJAL-3438 spotless for 2.11.2.0 tree | commitdiff
2021-08-11 Jim ProcterMerge branch 'features/JAL-2349_matrixvis' into feature... tree | commitdiff
2020-08-17 Jim ProcterJAL-3490 merged with 2.11.2 develop tree | commitdiff
2020-08-10 gmungocJAL-3490 match count independent of contiguous matches... patch/Release_2_11_1_Branch_patch_JAL-3490 tree | commitdiff
2020-07-07 gmungocJAL-1424 streamlined message checker, corrected applet... tree | commitdiff
2020-06-29 Jim ProcterMerge branch 'bug/JAL-3490findSpanHiddenGaps' into... tree | commitdiff
2020-05-19 gmungocMerge branch 'develop' into feature/JAL-3551Pymol tree | commitdiff
2020-05-18 gmungocMerge branch 'Jalview-JS/develop' into develop tree | commitdiff
2020-05-15 gmungocJAL-3551 pull up Close Viewer dialog to base class tree | commitdiff
2020-04-25 gmungocMerge branch 'develop' into feature/JAL-3551Pymol tree | commitdiff
2020-04-16 gmungocJAL-3567 report mapped location for virtual features... tree | commitdiff
2020-03-30 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2020-03-13 gmungocJAL-3551 working proof of concept of Jalview driving... tree | commitdiff
2020-03-09 gmungocMerge branch 'develop' into feature/JAL-2422ChimeraX tree | commitdiff
2020-02-28 gmungocJAL-3518 basic refactoring / pull up of superposeStruct... tree | commitdiff
2020-02-21 gmungocJAL-2422 general pull-up/removal of common or unused... tree | commitdiff
2020-02-20 gmungocJAL-2422 pull-up refactoring of structure commands... tree | commitdiff
2020-02-17 Jim ProcterJAL-3187 JAL-3533 JAL-3535 set feature settings dialog... tree | commitdiff
2020-02-12 Jim ProcterJAL-3187 applet alignFrame needs new api method tree | commitdiff
2020-02-04 gmungocJAL-2422 pull up refactoring in preparation for Chimera... tree | commitdiff
2019-12-11 gmungocJAL-3490 revised layout and search algorithm (more... tree | commitdiff
2019-10-08 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge tree | commitdiff
2019-07-10 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures tree | commitdiff
2019-06-24 Jim ProcterJAL-3330 mergeFeatureStyles - needs test coverage tree | commitdiff
2019-06-18 gmungocJAL-3304 option to export linked features in Jalview... tree | commitdiff
2019-06-18 Jim ProcterMerge branch 'features/JAL-2349_matrixvis' into merge... tree | commitdiff
2019-06-06 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2019-04-18 hansonrremoves unnecessary clearFastPaint tree | commitdiff
2019-04-18 hansonrCorrects incorrect calls to ViewportRanges.setEndSeq() tree | commitdiff
2019-04-18 hansonrhack for fastpaint Java bug upshifting one line after... tree | commitdiff
2019-04-18 hansonrreverting seqPanel.seqCanvas.clearFastPaint(); tree | commitdiff
2019-04-18 hansonradds an explicit clearing of the SeqCanvas fastPaint... tree | commitdiff
2019-04-04 gmungocJAL-3220 unneeded main methods removed tree | commitdiff
2019-03-21 Ben SoaresJAL-3130 Replaced deprecated Class.newInstance() with... tree | commitdiff
2019-03-20 Ben SoaresJAL-3130 Lots of deprecation fixes. See utils/deprecat... tree | commitdiff
2019-03-13 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2019-03-11 gmungocMerge branch 'feature/JAL-3127_seqidChainshading' into... tree | commitdiff
2019-03-05 gmungocMerge branch 'bug/JAL-2621' into develop tree | commitdiff
2019-03-05 gmungocMerge remote-tracking branch 'origin/bug/JAL-2839findWi... tree | commitdiff
2019-03-04 gmungocMerge branch 'bug/JAL-3099alignmentVisibleWidth' into... tree | commitdiff
2019-03-04 gmungocMerge branch 'bug/JAL-3120restoreFeatureColour' into... tree | commitdiff
2019-03-01 gmungocMerge branch 'bug/JAL-2791exportFilteredFeature' into... tree | commitdiff
2019-02-19 gmungocJAL-3187 hacks to get peptide variant in to Jmol hover... tree | commitdiff
2019-01-21 hansonradded Platform settings separating mouse use of win... tree | commitdiff
2019-01-21 hansonrisAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA... tree | commitdiff
2019-01-21 hansonrminor Platform.isAMac() clean up tree | commitdiff
2019-01-21 hansonrremoving indirect references to Platform.isAMac() tree | commitdiff
2019-01-17 gmungocMerge branch 'develop' into Jalview-BH/JAL-3026-JAL... tree | commitdiff
2019-01-16 Jim ProcterMerge branch 'features/pca_jaxb_datasetrefs_JAL-3171_JA... tree | commitdiff
2018-12-19 gmungocJAL-2621 Overview uses hand cursor in drag box, crossha... bug/JAL-2621 tree | commitdiff
2018-12-17 Jim ProcterMerge branch 'bug/JAL-2864nullOverviewCanvas' into... tree | commitdiff
2018-12-06 gmungocMerge branch 'develop' into Jalview-BH/JAL-3026-JAL... tree | commitdiff
2018-12-06 gmungocJAL-1854 fix Checkstyle import violations tree | commitdiff
2018-10-09 Jim ProcterJAL-3127 pass reference to AlignViewportI when creating... tree | commitdiff
2018-09-27 gmungocJAL-2791 refactored Export Features to apply all visibi... tree | commitdiff
2018-09-21 gmungocJAL-3120 preserve feature colour/mincolour/maxcolour... bug/JAL-3120restoreFeatureColour tree | commitdiff
2018-09-10 gmungocJAL-3099 use Alignment.getVisibleWidth() where wanted bug/JAL-3099alignmentVisibleWidth tree | commitdiff
2018-08-27 hansonrJAL-3026 alignmentFrame.statusBar.setText -> .setStatus tree | commitdiff
2018-08-21 hansonrmc_view references were MCview tree | commitdiff
2018-07-22 hansonrJAL-3032 Jmol upgrade org.jmol.java.BS -> javajs.util.BS tree | commitdiff
2018-06-22 gmungocJAL-3032 avoid assignments on the same line as synchronized tree | commitdiff
2018-05-07 gmungocJAL-1767 JAL-2647 hide 'Input Data..' for PCA loaded... tree | commitdiff
2018-05-04 gmungocJAL-2975 Shift-arrow keys to rotate PCA incrementally tree | commitdiff
2018-05-04 gmungocJAL-1767 refactorings to enable faithful restore of... tree | commitdiff
2018-04-27 gmungocJAL-2963 correctly dim PCA points with negative z-coord... tree | commitdiff
2018-04-27 gmungocJAL-1767 refactoring and tidying of RotatableCanvas... tree | commitdiff
2018-04-26 gmungocJAL-2962 rename run method (as not a Runnable) tree | commitdiff
2018-04-26 gmungocJAL-2962 code tidying/documentation (non-functional... tree | commitdiff
2018-04-18 gmungocMerge branch 'releases/Release_2_10_4_Branch' into... tree | commitdiff
2018-03-22 gmungocJAL-2929 unit test, tidy unused/unneeded fields/parameters tree | commitdiff
2018-03-16 gmungocMerge branch 'bug/JAL-2865removeGC' into develop tree | commitdiff
2018-03-14 gmungocJAL-2933 pass viewport in Finder constructor, find... bug/JAL-2839findWithHidden tree | commitdiff
2018-03-14 gmungocJAL-2933 gui and applet Finder hold a FinderI per viewport tree | commitdiff
2018-03-13 gmungocJAL-2839 refactored analysis.Finder and tests tree | commitdiff
2018-03-12 gmungocJAL-2933 remember Find position per viewport tree | commitdiff
2018-03-09 gmungocJAL-2839 Finder refactoring prior to fixing the defect tree | commitdiff
2018-03-07 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into... tree | commitdiff
2018-03-07 gmungocMerge branch 'bugs/JAL-2922' into releases/Release_2_10... tree | commitdiff
2018-03-07 gmungocJAL-2922 i18n and bespoke handler for Invert Selection tree | commitdiff
2018-03-07 gmungocJAL-2926 fix copy group consensus (and paste sequence... tree | commitdiff
2018-02-27 Jim ProcterMerge branch 'feature/JAL-2759' into merge/JAL-2759_2104 tree | commitdiff
2018-02-22 Jim ProcterMerge branch 'feature/JAL-984splitAdjuster' into releas... tree | commitdiff
2018-02-22 Jim ProcterJAL-984 ID width adjuster needs to be white ! tree | commitdiff
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