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Merge branch 'releases/Release_2_11_3_Branch'
[jalview.git] / src / jalview / bin / argparser / Arg.java
2023-11-13 James ProcterJAL-4090 JAL-1551 source license commit | commitdiff
2023-10-11 Ben SoaresJAL-4298 Added diagnostics and minor dimension changes... commit | commitdiff
2023-09-20 Ben SoaresJAL-4265 Use ColorUtils.parseColourString() and adjust... commit | commitdiff
2023-09-16 Ben SoaresJAL-629 Fix a test and omit an incorrect error message... improvement/JAL-4269_reduce_variants_of_common_subvalue_parameters commit | commitdiff
2023-09-16 Ben SoaresJAL-4265 Added --bgcolour for --structureimage output... commit | commitdiff
2023-09-16 Ben SoaresJAL-4269 Now using --width, --height, --scale for both... commit | commitdiff
2023-09-11 Ben SoaresJAL-4277 --mkdirs with cautious refusal for paths with .. commit | commitdiff
2023-09-07 Ben SoaresJAL-629 Change names of Opt.ALLOWALL to Opt.ALLOWMULTII... improvement/JAL-629_Apply_alignment_options_to_all_globbed_files commit | commitdiff
2023-08-17 Ben SoaresMerge branch 'feature/JAL-629_--output_-_means_output_t... commit | commitdiff
2023-08-17 Ben SoaresJAL-3830 JAL-4160 Remove --noheadless as --gui does... commit | commitdiff
2023-08-10 Ben SoaresJAL-629 STDOUT documentation. Opt.STDOUT narrower... commit | commitdiff
2023-06-07 James ProcterMerge branch 'patch/JAL-4195_cli_eps_export_npe' into... commit | commitdiff
2023-06-06 James ProcterJAL-4160 --colour can now take user defined scheme... commit | commitdiff
2023-06-01 Ben SoaresJAL-4193 JAL-4194 sessionProperties layer in Cache... commit | commitdiff
2023-05-30 Ben SoaresJAL-629 JAL-4121 Added documentation to Help docs and... commit | commitdiff
2023-05-30 Ben SoaresJAL-629 Better formatting of Arg.Opt options in usage... commit | commitdiff
2023-05-27 Ben SoaresJAL-4121 Store Arg.Opts in bootstrapArgs. Change Opt... commit | commitdiff
2023-05-23 Ben SoaresJAL-629 Added --structureimage code and formatting... commit | commitdiff
2023-05-22 Ben SoaresJAL-629 --structureimage with formatting args. commit | commitdiff
2023-05-21 Ben SoaresJAL-629 Clarify sections of arguments with --help-all... commit | commitdiff
2023-05-20 Ben SoaresJAL-4187 JAL-629 JAL-3830 small adjustments after furth... commit | commitdiff
2023-05-20 Ben SoaresJAL-4187 JAL-629 JAL-3830 adjustments to Cygwin and... commit | commitdiff
2023-05-19 Ben SoaresJAL-629 Added Arg.Types and additional --help-type... commit | commitdiff
2023-05-18 Ben SoaresJAL-629 fixes to typed args commit | commitdiff
2023-05-18 Ben SoaresJAL-629 Added 'Type' to args and argvalues commit | commitdiff
2023-05-15 Ben SoaresRevert "JAL-629 Add a --threads argument to allow a... commit | commitdiff
2023-05-15 Ben SoaresJAL-629 Add a --threads argument to allow a limited... commit | commitdiff
2023-05-13 Ben SoaresJAL-629 launcher shell script uses jalview.bin.Launcher... commit | commitdiff
2023-05-12 Ben SoaresJAL-629 Added --opened arg which is like limiting ... commit | commitdiff
2023-05-11 Ben SoaresJAL-629 Add some shortnames to args. Add Opt.OUTPUT... commit | commitdiff
2023-05-11 Ben SoaresJAL-629 Fix --tempfac. Hide non-working --notempfac... commit | commitdiff
2023-05-11 Ben SoaresJAL-629 Added linkedId to ArgValuesMap for reference... commit | commitdiff
2023-05-10 Ben SoaresJAL-629 More docs. Usage statement. Adjust some logging... commit | commitdiff
2023-05-09 Ben SoaresJAL-629 Add --seqid for non-subval use, make arg value... commit | commitdiff
2023-05-09 Ben SoaresJAL-629 change --renderer to --textrenderer to be more... commit | commitdiff
2023-05-04 Ben SoaresJAL-629 More NG arguments: --features, --annotations... commit | commitdiff
2023-05-03 Ben SoaresJAL-629 added eps and imagemap. Added --output and... commit | commitdiff
2023-05-02 Ben SoaresJAL-629 Changed --newframe and --allframes to --new... commit | commitdiff
2023-05-02 Ben SoaresJAL-629 Add --renderer arg/subval for vector output... commit | commitdiff
2023-04-30 Ben SoaresJAL-629 Change behaviour of --open GLOB to increment... commit | commitdiff
2023-04-29 Ben SoaresJAL-629 Added --all arg, [*] linkedId and functionality... commit | commitdiff
2023-04-28 Ben SoaresJAL-629 Change colour scheme shortnames to something... commit | commitdiff
2023-04-27 Ben SoaresJAL-629 Changed --increment to --newframe to make sense... commit | commitdiff
2023-04-24 Ben SoaresJAL-629 Add --nowebdiscovery. Distinguish arg=="open... commit | commitdiff
2023-04-23 Ben SoaresJAL-629 Change --open to --append and --opennew to... commit | commitdiff
2023-04-22 Ben SoaresJAL-629 Test and fix --annotation --ssannotation args... commit | commitdiff
2023-04-04 Ben SoaresJAL-629 more info in usage statement commit | commitdiff
2023-04-04 Ben SoaresJAL-629 Start of Usage statement commit | commitdiff
2023-04-04 Ben SoaresJAL-629 More consistent printing of --arguments. Exampl... commit | commitdiff
2023-04-04 Ben SoaresJAL-629 --initsubstitutions as a bootstrap arg, new... commit | commitdiff
2023-04-03 Ben SoaresJAL-629 added setprop. More filename based substitution... commit | commitdiff
2023-03-29 Ben SoaresJAL-629 Added --opennew --nonews --nosplash. Added... commit | commitdiff
2023-03-28 Ben SoaresJAL-629 Opening files in new windows. not working yet commit | commitdiff
2023-03-25 Ben SoaresJAL-629 improvements to argparser toString. Improvement... commit | commitdiff
2023-03-24 Ben SoaresJAL-629 Test tidyup commit | commitdiff
2023-03-23 Ben SoaresJAL-629 refactor ArgParser and helper classes all to... commit | commitdiff