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Merge branch 'releases/Release_2_11_3_Branch'
[jalview.git] / src / jalview / gui / SeqPanel.java
2023-11-03 James ProcterJAL-4090 JAL-1551 spotlessApply commit | commitdiff
2023-11-01 James ProcterJAL-4260 encapsulate logic for resolving nearest column... patch/JAL-4260_fix_up_select_via_ruler_in_wrapped commit | commitdiff
2023-08-10 Ben SoaresJAL-629 Change all stdout and stderr output to use... commit | commitdiff
2023-03-20 James ProcterJAL-4134 propagate column selection changes in tree... commit | commitdiff
2022-10-20 Jim ProcterJAL-2349 JAL-3855 - interactive point-wise row/column... commit | commitdiff
2022-10-19 Jim ProcterJAL-2349 JAL-4033 refactored contact matrix geom calc... commit | commitdiff
2022-04-18 Jim ProcterJAL-3997 check for tooltip being null before checking... bug/JAL-3997_NPE_in_wrapped_mode commit | commitdiff
2022-03-08 Jim ProcterJAL-3438 spotless for 2.11.2.0 commit | commitdiff
2022-02-11 Jim ProcterJAL-3949 - refactor logging from jalview.bin.Cache... commit | commitdiff
2022-02-11 Ben SoaresJAL-3949 Complete new abstracted logging framework... commit | commitdiff
2021-09-15 Jim ProcterJAL-3638 JAL-3680 fix docs for Alt + Arrow LRUD in... commit | commitdiff
2021-02-18 gmungocJAL-3822 pass panel height and width to wrapped geometr... commit | commitdiff
2020-08-17 Jim ProcterJAL-3490 merged with 2.11.2 develop commit | commitdiff
2020-08-17 Jim ProcterMerge branch 'patch/Release_2_11_1_Branch_patch_JAL... commit | commitdiff
2020-08-10 gmungocJAL-3490 match count independent of contiguous matches... patch/Release_2_11_1_Branch_patch_JAL-3490 commit | commitdiff
2020-07-27 Jim ProcterJAL-3697 show total number of features not shown commit | commitdiff
2020-07-27 Jim ProcterJAL-3697 show total number of features not shown commit | commitdiff
2020-07-04 Jim ProcterJAL-3638 shift+arrow keys in cursor mode jumps cursor... commit | commitdiff
2020-05-18 gmungocMerge branch 'Jalview-JS/develop' into develop commit | commitdiff
2020-05-01 gmungocMerge branch 'bug/JAL-3613emblCDSTracking' into release... commit | commitdiff
2020-05-01 gmungocJAL-3613 check sequence overlap when matching search... commit | commitdiff
2020-04-21 Jim ProcterMerge branch 'develop' into releases/Release_2_11_1_Branch commit | commitdiff
2020-04-16 gmungocJAL-3567 report mapped location for virtual features... commit | commitdiff
2020-04-14 gmungocJAL-3583 remove debug logging, Javadoc added commit | commitdiff
2020-04-12 gmungocJAL-3583 consistent last[Formatted]Tooltip, show once... commit | commitdiff
2020-04-06 Jim ProcterMerge branch 'develop' into releases/Release_2_11_1_Branch commit | commitdiff
2020-04-06 gmungocMerge branch 'develop' into Jalview-JS/develop commit | commitdiff
2020-04-06 gmungocJAL-3579 no Feature Editor if features not shown commit | commitdiff
2020-03-31 Jim ProcterMerge branch 'documentation/Release_2_11_1_Branch'... commit | commitdiff
2020-03-30 gmungocMerge branch 'develop' into Jalview-JS/develop commit | commitdiff
2020-03-19 gmungocJAL-3305 don't propagate an empty SelectionGroup to... commit | commitdiff
2020-03-06 gmungocJAL-3468 i18n and additional unit tests feature/JAL-3468featureDescriptionEllipsis commit | commitdiff
2020-03-05 gmungocJAL-3303 suppressed for 2.11.1 commit | commitdiff
2020-03-03 soaresJAL-3468 Adapted methods to report how many features... commit | commitdiff
2019-10-08 gmungocMerge branch 'develop' into Jalview-JS/develop commit | commitdiff
2019-07-08 gmungocJAL-3187 derived peptide variants tweaks and tests commit | commitdiff
2019-07-05 gmungocJAL-3187 initial refactoring towards peptide variant... commit | commitdiff
2019-07-02 gmungocJAL-3071 restore correct if-else branches in startScrolling commit | commitdiff
2019-06-17 gmungocJAL-2792 JAL-3187 linked features (if shown) in Feature... commit | commitdiff
2019-06-17 gmungocJAL-3187 add sequence to feature details table (and... commit | commitdiff
2019-06-06 gmungocMerge branch 'develop' into trialMerge commit | commitdiff
2019-03-27 hansonrisJS cleanup commit | commitdiff
2019-03-23 gmungocJAL-1889 remove debug logging, add updateLayout() commit | commitdiff
2019-03-22 gmungocJAL-1889 more debug logging commit | commitdiff
2019-03-21 gmungocJAL-1889 better debug logging commit | commitdiff
2019-03-21 gmungocJAL-1889 temporary debug in findColumn() commit | commitdiff
2019-03-20 gmungocMerge branch 'develop' into Jalview-JS/develop commit | commitdiff
2019-03-20 gmungocJAL-3093 fine tuning of SeqPanel tooltip commit | commitdiff
2019-03-15 gmungocJAL-3071 corrections to IdPanel$ScrollThread commit | commitdiff
2019-03-13 gmungocMerge branch 'develop' into trialMerge commit | commitdiff
2019-03-04 gmungocMerge branch 'bug/JAL-3072scrollThread' into merge... commit | commitdiff
2019-03-01 gmungocMerge branch 'feature/JAL-3093wrappedModeTooltips'... commit | commitdiff
2019-03-01 gmungocMerge branch 'feature/JAL-1244stretchStatusMsg' into... commit | commitdiff
2019-03-01 gmungocMerge branch 'bug/JAL-3164complementOverview' into... commit | commitdiff
2019-02-26 gmungocJAL-3201 group colour schemes distinct instances commit | commitdiff
2019-02-22 gmungocJAL-2915 don't recalculate Overview on scroll to positi... commit | commitdiff
2019-02-21 gmungocJAL-3187 handle no mapping / complement features withou... commit | commitdiff
2019-02-19 gmungocJAL-3187 hacks to get peptide variant in to Jmol hover... commit | commitdiff
2019-01-28 gmungocJAL-3032 revert change to tooltip StringBuilder length commit | commitdiff
2019-01-26 hansonrJalview.isJS() --> Platform.isJS(), DBRefEntry[] -... commit | commitdiff
2019-01-23 hansonrMenus close properly, toolips restored commit | commitdiff
2019-01-21 hansonrisAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA... commit | commitdiff
2019-01-21 gmungocJAL-3187 (hacked up) show complement features on struct... commit | commitdiff
2019-01-18 gmungocJAL-3187 basic first version for tooltips only (renderi... commit | commitdiff
2018-12-20 hansonrseq panel issue with shift-left-mouse drag fix commit | commitdiff
2018-12-20 hansonrlabel work; adds preliminary _j2sclasslist.txt commit | commitdiff
2018-11-28 gmungocJAL-3164 redraw complement overview on hide columns bug/JAL-3164complementOverview commit | commitdiff
2018-10-08 gmungocJAL-1244 comments, javadoc, method signature tweaks feature/JAL-1244stretchStatusMsg commit | commitdiff
2018-10-08 gmungocJAL-1244 editSequence extract method refactoring commit | commitdiff
2018-10-05 gmungocJAL-1244 improved status message for insert/delete gap commit | commitdiff
2018-10-04 gmungocJAL-1244 no status message (yet) for locked edit of... commit | commitdiff
2018-10-04 gmungocJAL-1244 status message for insert/delete gaps on singl... commit | commitdiff
2018-10-04 gmungocJAL-1244 status message while dragging a stretch group commit | commitdiff
2018-10-04 gmungocJAL-3093 unit tests, no mouse action over left/right... commit | commitdiff
2018-10-03 gmungocJAL-3093 tweaks to code and test for 3px gap above... commit | commitdiff
2018-10-02 gmungocJAL-3093 unit tests for SeqPanel.findMousePosition commit | commitdiff
2018-10-02 gmungocJAL-3093 added MousePos.isOverAnnotation() for extra... commit | commitdiff
2018-10-01 gmungocJAL-3093 'read-only' annotations when in wrapped mode commit | commitdiff
2018-10-01 gmungocJAL-3093 show annotation tooltips and status message... commit | commitdiff
2018-08-27 hansonrJAL-3026 alignmentFrame.statusBar.setText -> .setStatus commit | commitdiff
2018-07-26 gmungocJAL-3071 IdPanel.ScrollThread for JalviewJS, Javadoc commit | commitdiff
2018-07-26 gmungocJAL-3071 SeqPanel scroll thread now interruptible in... commit | commitdiff
2018-07-26 gmungocMerge remote-tracking branch 'origin/bug/JAL-3072scroll... commit | commitdiff
2018-07-25 gmungocJAL-3074 don't scroll up/down on drag out of scale... commit | commitdiff
2018-07-25 gmungocJAL-3072 SeqPanel.stopScrolling on mouse up in scale... commit | commitdiff
2018-07-16 gmungocJAL-3060 more extensive extract method refactoring... commit | commitdiff
2018-07-09 gmungocJAL-1858 separate method highlightSearchResults with... commit | commitdiff
2018-07-09 gmungocJAL-3060 entry points for createFeatures, amendFeatures commit | commitdiff
2018-07-09 gmungocJAL-3060 extract FeatureEditor class task/JAL-3060featureEditor commit | commitdiff
2018-07-06 Jim ProcterJAL-3048 amendFeatures as dialog runner - repaint after... commit | commitdiff
2018-07-02 hansonrJAL-3032 JTable work; JSUtil.jQuery object; drag-drop; commit | commitdiff
2018-05-07 gmungocMerge branch 'releases/Release_2_10_4_Branch' into... commit | commitdiff
2018-04-05 Jim ProcterJAL-2945 provide access to last highlighted results commit | commitdiff
2018-03-08 gmungocMerge remote-tracking branch 'origin/releases/Release_2... merges/JAL-2906_update2_11_from_2_10_4 commit | commitdiff
2018-03-08 gmungocJAL-2930 use MouseWheelEvent.getPreciseWheelRotation... commit | commitdiff
2018-03-07 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into... commit | commitdiff
2018-02-06 kiramtMerge branch 'develop' into feature/JAL-2759 feature/JAL-2759 commit | commitdiff
2018-01-19 kiramtJAL-2759 Changes to getVisibleSequenceStrings after... commit | commitdiff
2018-01-15 kiramtJAL-2759 Rename findColumnPosition and adjustForHiddenC... commit | commitdiff
2018-01-10 gmungocJAL-1793 update spike branch to latest commit | commitdiff
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