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Merge branch 'releases/Release_2_11_3_Branch'
[jalview.git] / src / jalview / gui / SequenceFetcher.java
2023-08-10 Ben SoaresJAL-629 Change all stdout and stderr output to use... commit | commitdiff
2022-11-09 Ben SoaresJAL-3416 Remove all JFrame/JInternalFrame icons (set... commit | commitdiff
2022-11-03 Ben SoaresJAL-3416 Start to add JInternalFrame icons (to replace... commit | commitdiff
2022-02-11 Jim ProcterJAL-3949 - refactor logging from jalview.bin.Cache... commit | commitdiff
2022-02-11 Ben SoaresJAL-3949 Complete new abstracted logging framework... commit | commitdiff
2021-09-29 Ben SoaresJAL-3885 Made the database JComboBox have StringPair... commit | commitdiff
2021-09-02 Jim ProcterMerge branch 'develop' into features/r2_11_2/JAL-3829_3... commit | commitdiff
2021-09-02 gmungocJAL-3509 JAL-1842 minor tidying of code commit | commitdiff
2021-08-30 Jim ProcterJAL-3829 3d-beacons has a custom alignment retrieval... commit | commitdiff
2021-04-06 Jim ProcterJAL-3832 dummy 3d-beacons database client and code... commit | commitdiff
2020-02-06 gmungocJAL-3509 JAL-1842 minor tidying of code commit | commitdiff
2019-07-16 gmungocJAL-3144 better error message if no database selected commit | commitdiff
2019-01-30 gmungocMerge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' of commit | commitdiff
2019-01-30 gmungocJAL-3144 don't change comma to semi-colon if not requested! commit | commitdiff
2019-01-30 hansonrwoops. commit | commitdiff
2019-01-30 hansonrfixes unidentified Java problem commit | commitdiff
2019-01-26 hansonrJalview.isJS() --> Platform.isJS(), DBRefEntry[] -... commit | commitdiff
2019-01-21 hansonradded Platform settings separating mouse use of win... commit | commitdiff
2019-01-21 hansonrisAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA... commit | commitdiff
2018-10-30 gmungocJAL-3144 left aligned looks better (and works in Jalvie... commit | commitdiff
2018-10-30 gmungocJAL-3144 close SequenceFetcher before opening PDB/Unipr... commit | commitdiff
2018-10-30 gmungocJAL-3144 spelling, Javadoc, abstract method for JalviewJS commit | commitdiff
2018-10-29 gmungocJAL-3144 SequenceFetcher without JDatabaseTree commit | commitdiff
2018-10-04 gmungocJAL-3132 set status message when over sequence id or... commit | commitdiff
2018-08-27 hansonrJAL-3026 alignmentFrame.statusBar.setText -> .setStatus commit | commitdiff
2018-06-27 hansonrJAL-3032 just the changes pulled already commit | commitdiff
2018-06-26 Jim ProcterMerge branch 'tasks/JAL-3035_remove_dasobert_dependency... commit | commitdiff
2018-06-26 Jim ProcterJAL-3035 - jalview-das is no more ! commit | commitdiff
2018-06-22 gmungocJAL-3032 avoid assignments on the same line as synchronized commit | commitdiff
2018-04-12 gmungocJAL-2944 tidies for review comments commit | commitdiff
2017-11-15 gmungocJAL-2835 spike updated with latest commit | commitdiff
2017-11-07 Jim ProcterJAL-2810 ‘Close’ is now ‘Cancel’ in SequenceFetcher... commit | commitdiff
2017-11-07 Jim ProcterJAL-2810 working back button shown for bulk ID retrieva... commit | commitdiff
2017-10-27 Jim ProcterJAL-2810 prototype retrieve ID tab for the Uniprot... commit | commitdiff
2017-10-03 gmungocJAL-2738 copy to spikes/mungo commit | commitdiff
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList commit | commitdiff
2017-08-16 Jim ProcterJAL-2418 source formatting commit | commitdiff
2017-06-09 gmungocJAL-2446 merged to spike branch commit | commitdiff
2017-05-12 gmungocJAL-2480 efficient test for features present on sequence commit | commitdiff
2017-04-10 tcofoegbuJAL-2473 added improvement to apply default / custom... commit | commitdiff
2016-11-28 gmungocMerge branch 'develop' into trialMerge commit | commitdiff
2016-11-25 gmungocMerge branch 'develop' into trialMerge commit | commitdiff
2016-11-24 tcofoegbuJAL-2326 updated references of JOptionPane to JvOptionPane commit | commitdiff
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch commit | commitdiff
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... commit | commitdiff
2016-10-05 Jim ProcterJAL-2189 source formatting commit | commitdiff
2016-08-30 Jim ProcterMerge branch 'develop' into merge/develop_bug/JAL-2154p... merge/develop_bug/JAL-2154projectMappings commit | commitdiff
2016-08-30 gmungocJAL-2183 simplified database tree actionPerformed,... commit | commitdiff
2016-08-30 gmungocJAL-2183 removed redundant (overriden) add panel to... commit | commitdiff
2016-08-30 gmungocMerge branch 'develop' into features/filetypeEnum commit | commitdiff
2016-08-13 Jim ProcterJAL-2154 ignore all but the primary source resolved... commit | commitdiff
2016-08-13 Jim ProcterJAL-2154 make sure we wait for constructor thread to... commit | commitdiff
2016-08-11 Jim ProcterJAL-2154 jalview.gui.SequenceFetcher.fetchAndShow(db... commit | commitdiff
2016-08-11 Jim ProcterJAL-2154 JAL-1993 relocate show dbchooser action out... commit | commitdiff
2016-07-12 gmungocFileFormat enum wip changes commit | commitdiff
2016-06-21 Jim ProcterMerge branch 'features/JAL-2110_crossRefDuplications... commit | commitdiff
2016-06-16 gmungocJAL-1993 close sequence fetcher when opening database... commit | commitdiff
2016-06-16 gmungocJAL-1993 hide sequence fetcher dialogue until database... commit | commitdiff
2016-06-03 gmungocJAL-2110 random stuff commit | commitdiff
2016-05-26 gmungocJAL-1993 open sequence fetcher tree on 'fetch sequences' commit | commitdiff
2016-05-03 gmungocJAL-2050 hide introns also when fetching Ensembl xrefs... commit | commitdiff
2016-04-29 tcofoegbumerge commit | commitdiff
2016-04-29 gmungocJAL-2051 better checking of retrieved / duplicated... commit | commitdiff
2016-04-27 tcofoegbure-enabled new uniprot sequence fetcher on spike branch commit | commitdiff
2016-04-26 tcofoegbuJAL-1563 reverted to old uniprot fetcher to enable... commit | commitdiff
2016-04-22 tcofoegbuJAL-2071 further refactoring, optimisation, and house... commit | commitdiff
2016-04-19 tcofoegbuJAL-2071 architectural improvement for Plugable Free... commit | commitdiff
2016-04-12 gmungocJAL-2050 only hide introns if exons are present! Remove... commit | commitdiff
2016-04-11 gmungocJAL-2051 fetch Ensembl Gene accessions one at a time commit | commitdiff
2016-04-11 gmungocJAL-1705 (new preference option to) hide introns when... commit | commitdiff
2016-03-15 gmungocJAL-2016 FeatureSettingsI now FeatureSettingsModelI commit | commitdiff
2016-02-22 gmungocJAL-1705 first pass at applying preset feature colourin... commit | commitdiff
2016-02-19 gmungocJAL-1705 more lenient test for 'sequence retrieved' commit | commitdiff
2016-02-12 gmungocJAL-1705 various refactoring towards Uniprot-to-Ensembl... commit | commitdiff
2016-01-28 gmungocMerge branch 'develop' into JAL-1705_trialMerge commit | commitdiff
2016-01-08 gmungocJAL-1705 DbSourceProxy properties converted to methods... commit | commitdiff
2016-01-05 gmungocMerge remote-tracking branch 'origin/features/JAL-1705_... commit | commitdiff
2015-11-21 gmungocJAL-653 JAL-1968 FeaturesFile now handles Jalview or... commit | commitdiff
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2 commit | commitdiff
2015-10-15 Jim ProcterMerge branch 'develop' into features/JAL-1705_ensembl commit | commitdiff
2015-10-15 tcofoegbuJAL-1479 refactored SequenceI interface - changed getDB... commit | commitdiff
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright commit | commitdiff
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... commit | commitdiff
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports commit | commitdiff
2015-08-13 tcofoegbuJAL-1826 bug fix to select pdb sequence fetcher via... commit | commitdiff
2015-06-28 Jim ProcterJAL-1705 refactored code for dbsource reggae validator... commit | commitdiff
2015-06-22 Jim ProcterJAL-1780 JAL-653 Format/AppletFormat import and export... commit | commitdiff
2015-06-22 Jim ProcterJAL-653 JAL-1780 reorder imports commit | commitdiff
2015-06-04 gmungocClear status bar message when initialisation complete commit | commitdiff
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch commit | commitdiff
2015-03-15 Charles OfoegbuJAL-1667 updated test and internationalization messages commit | commitdiff
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... commit | commitdiff
2015-03-04 Charles OfoegbuJAL-1668 First version JAL-1668 commit | commitdiff
2015-03-02 Charles Ofoegbuhouse keeping commit | commitdiff
2015-02-26 Charles OfoegbuJAL-1667 PDBe Search Interface implementation commit | commitdiff
2015-02-19 gmungocJAL-1665 refactored Sequence.getSequenceFeatures features/sequenceFeatureRefactor commit | commitdiff
2014-12-15 Jim ProcterJAL-1620 version bump and release notes commit | commitdiff
2014-09-26 darolmarJAL-1355 commit | commitdiff
2014-09-23 darolmarJAL-1355 commit | commitdiff
2014-06-06 Jim ProcterJAL-1517 source formatting commit | commitdiff
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