source.jalview.org Git - jalview.git/history - src/jalview/hmmer/HMMAlign.java

2021-10-06	Mateusz Warowny	JAL-3899 Update usages of uniquify and deuniquify.	blob \| commitdiff
2019-07-05	tva	JAL-2629 uniquify all hmmer command sequence outputs	blob \| commitdiff \| diff to current
2019-07-05	tva	JAL-2629 fix file format issues preventing hmmsearch...	blob \| commitdiff \| diff to current
2019-07-02	tva	JAL-2629 add simple jackhmmer functionality	blob \| commitdiff \| diff to current
2019-06-10	tva	JAL-3297 pad gaps in alignment to ensure hmmalign runs	blob \| commitdiff \| diff to current
2019-06-06	tva	JAL-3285 fix incorrect file paths on HMMAlign/Search...	blob \| commitdiff \| diff to current
2018-04-17	gmungoc	Merge branch 'features/mchmmer' of https://source.jalvi...	blob \| commitdiff \| diff to current
2018-04-17	gmungoc	JAL-2629 choice of hmm profile now a parameter not...	blob \| commitdiff \| diff to current
2018-04-17	Mungo Carstairs	JAL-2937 working Cygwin bash execution of hmmbuild...	blob \| commitdiff \| diff to current
2018-04-16	gmungoc	JAL-2629 JAL-2937 remove redundant is/setHMMConsensusSe...	blob \| commitdiff \| diff to current
2018-04-09	Mungo Carstairs	JAL-2937 Cygwin path preference, method refactoring	blob \| commitdiff \| diff to current
2018-03-30	gmungoc	JAL-2629 ensure hmm consensus sequence set on alignment...	blob \| commitdiff \| diff to current
2018-03-30	gmungoc	JAL-2629 add title to output alignment window	blob \| commitdiff \| diff to current
2018-03-07	gmungoc	JAL-2629 storage and lifecycle of alignment/group HMM...	blob \| commitdiff \| diff to current