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JAL-2909 JAL-3894 hack in support to import regions of an unindexed SAM file.
[jalview.git] / src / jalview / io / BamFile.java
2021-10-01 Jim ProcterJAL-2909 JAL-3894 hack in support to import regions... features/JAL-2909_bamImport_2_11_2 blob | commitdiff
2018-03-20 Jim ProcterJAL-2909 separate reverse and forward strand reads... feature/JAL-2909bamfiles_features blob | commitdiff | diff to current
2018-03-20 Jim ProcterJAL-2909 recognise .bam extension in URL and allow... blob | commitdiff | diff to current
2018-03-02 Jim ProcterJAL-2909 add sequence feature for quality blob | commitdiff | diff to current
2018-03-02 Jim ProcterJAL-2909 add sequence feature for insertions blob | commitdiff | diff to current
2018-02-28 kiramtJAL-2909 Gaps at start of reads only from start of... blob | commitdiff | diff to current
2018-02-28 kiramtJAL-2909 Wire up coordinates dialog with bam file reader blob | commitdiff | diff to current
2018-02-27 kiramtJAL-2909 Tidy up bam file cigar code blob | commitdiff | diff to current
2018-02-26 kiramtJAL-2909 Bam file parsing with insertions, first pass blob | commitdiff | diff to current
2018-02-21 kiramtJAL-2909 Partial insertions blob | commitdiff | diff to current
2018-02-20 kiramtJAL-2909 Insertions almost blob | commitdiff | diff to current
2018-02-19 kiramtJAL-2909 Read in a bam file - but strand/location unaware blob | commitdiff | diff to current