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Merge branch 'releases/Release_2_11_3_Branch'
[jalview.git] / src / jalview / ws / dbsources / EBIAlfaFold.java
2023-08-10 Ben SoaresJAL-629 Change all stdout and stderr output to use... commit | commitdiff
2023-05-22 James ProcterJAL-4134 only build tree when showing it in the tree... commit | commitdiff
2023-05-19 James ProcterMerge branch 'develop' into features/JAL-4134_use_annot... commit | commitdiff
2023-05-19 James ProcterJAL-1551 spotlessApply commit | commitdiff
2023-05-18 James ProcterJAL-4134 column grouping model and methods moved to... commit | commitdiff
2023-04-19 Ben SoaresJAL-629 Now showing temp fac and secondary structure... commit | commitdiff
2023-04-14 Ben SoaresJAL-629 Adding PAE and TFType at structure loading... commit | commitdiff
2023-04-12 Ben SoaresMerge branch 'develop' into features/r2_11_2_alphafold... commit | commitdiff
2023-04-12 Ben SoaresJAL-629 allow comments in argfiles '#' commit | commitdiff
2023-03-25 Ben SoaresJAL-629 improvements to argparser toString. Improvement... commit | commitdiff
2023-03-08 James ProcterMerge branch 'features/r2_11_2_alphafold/JAL-629' into... commit | commitdiff
2023-03-02 Ben SoaresJAL-629 slight tidy up commit | commitdiff
2023-03-02 Ben SoaresJAL-629 Removal of unnecessary methods. Set pLTTD tempf... commit | commitdiff
2023-03-02 Ben SoaresJAL-629 Some refactoring to allow more flexible use... commit | commitdiff
2023-02-27 Ben SoaresJAL-629 add AF examples for FER1_SPIOL. Link and displa... commit | commitdiff
2023-02-27 James ProcterJAL-4134 allow tree groups to be stored/recovered on... commit | commitdiff
2023-02-27 Ben SoaresMerge branch 'develop' into features/r2_11_2_alphafold... commit | commitdiff
2023-02-27 Ben SoaresJAL-629 removed debug prints. added .cif. added some... commit | commitdiff
2023-02-24 James ProcterJAL-629 JAL-4124 JAL-3855 test to check we can import... commit | commitdiff
2023-02-03 Ben SoaresJAL-629 Fasta sequence id reading whitespace fix. Flexi... commit | commitdiff
2023-01-23 Ben SoaresJAL-629 Attempts to add PAE to structure. --headless... commit | commitdiff
2023-01-11 Ben SoaresJAL-629 refactoring TFType. Remove i18n identification... commit | commitdiff
2022-12-08 Ben SoaresJAL-629 Allow attachment of pAE file to a particular... commit | commitdiff
2022-12-05 Ben SoaresJAL-629 implementation of --tempfac options commit | commitdiff
2022-10-17 Jim ProcterJAL-3855 bump AF version to 3 - keep contact renderer... commit | commitdiff
2022-10-17 Jim ProcterJAL-3855 report download errors as errors! commit | commitdiff
2022-10-17 Jim ProcterJAL-2349 JAL-3855 Integrate pAE retrieval in StructureF... commit | commitdiff
2022-10-15 Jim ProcterJAL-3855 import pAE when StructureSelectionManager... commit | commitdiff
2022-10-14 Jim ProcterJAL-3855 refactor the pAE retrieval code so it can... commit | commitdiff
2022-06-24 Jim ProcterJAL-2349 JAL-3855 formatting commit | commitdiff
2022-06-24 Jim ProcterJAL-3855 update EBI Alphafold barcoded URL generation... commit | commitdiff
2022-06-10 Jim ProcterMerge branch 'features/r2_11_2_alphafold/JAL-2349_JAL... commit | commitdiff
2022-03-08 Jim ProcterJAL-3438 spotless for 2.11.2.0 commit | commitdiff
2022-02-16 Jim ProcterMerge branch 'develop' into features/r2_11_2_alphafold... commit | commitdiff
2021-12-13 Jim ProcterJAL-3855 JAL-3829 don’t need to make up alphafold model... commit | commitdiff
2021-12-08 Jim ProcterJAL-3929 URLencode pdbid to remove problematic characte... commit | commitdiff
2021-09-14 Jim ProcterJAL-3829 JAL-3855 ignore case when detecting alphafold ID commit | commitdiff
2021-08-30 Jim ProcterJAL-3829 generalised Alphafold retrieval mechanism... commit | commitdiff
2021-08-18 Jim ProcterJAL-3855 JAL-2349 download PAE matrix along with alpha... commit | commitdiff
2021-07-27 Jim ProcterJAL-3855 ALPHAFOLD database source based on the PDB... commit | commitdiff