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JAL-3141 Added a '.fa' to filename examples
[jalview.git] / src /
2019-01-24 Ben SoaresJAL-3141 Added a '.fa' to filename examples tree | commitdiff
2019-01-24 Ben SoaresJAL-3141 Change of label tree | commitdiff
2019-01-24 Ben SoaresJAL-3141 Removed border around example filenames in... tree | commitdiff
2019-01-24 Ben SoaresJAL-3141 New layout and wording of Backups Preferences... tree | commitdiff
2019-01-24 Ben SoaresJAL-3141 Reformatted code in eclipse tree | commitdiff
2019-01-23 Ben SoaresJAL-3141 Added Presets options in the Backups Preferenc... tree | commitdiff
2019-01-22 Ben SoaresJAL-3141 Fixed what happens when suffix template has... tree | commitdiff
2019-01-21 Ben SoaresJAL-3141 Rejigged the Preferences tab and changed some... tree | commitdiff
2019-01-20 Ben SoaresJAL-3141 removing diagnostic output tree | commitdiff
2019-01-20 Ben SoaresJAL-3141 Fixed example filenames in Preferences pane... tree | commitdiff
2019-01-20 Ben SoaresJAL-3141 Changed suffix position to after the extension... tree | commitdiff
2019-01-20 Ben SoaresJAL-3141 Re-added some changes in Jalview2XML missed... tree | commitdiff
2019-01-18 Jim ProcterMerge branch 'feature/JAL-3063jaxbNoCastor' into featur... tree | commitdiff
2019-01-18 Jim ProcterMerge branch 'develop' into feature/JAL-3063jaxbNoCastor tree | commitdiff
2019-01-17 Jim ProcterJAL-3116 clear out whitespace when materialising Sequen... tree | commitdiff
2019-01-16 Ben SoaresJAL-3141 Remove no longer used exampleLabel tree | commitdiff
2019-01-16 Jim ProcterMerge branch 'feature/JAL-3063jaxbNoCastor' into develop tree | commitdiff
2019-01-16 Jim ProcterMerge branch 'features/pca_jaxb_datasetrefs_JAL-3171_JA... tree | commitdiff
2019-01-15 Jim ProcterJAL-1767 refactor associated view logic to public metho... tree | commitdiff
2019-01-14 Ben SoaresJAL-3141 Forgot this file, sorry! tree | commitdiff
2019-01-14 Ben SoaresJAL-3141 Added a 'Save Project as...' File menu item... tree | commitdiff
2019-01-14 Ben SoaresJAL-3141 Made more constants tree | commitdiff
2019-01-14 gmungocJAL-3186 remove Variable Colour from popup menu tree | commitdiff
2019-01-14 gmungocJAL-2069 wider dialog so all fields show! tree | commitdiff
2019-01-14 gmungocJAL-2069 clear any error colour when setting threshold... tree | commitdiff
2019-01-14 gmungocJAL-3125 tidy up tree | commitdiff
2019-01-14 gmungocJAL-3125 avoid slider 'rounding' threshold field value tree | commitdiff
2019-01-09 Ben SoaresJAL-3141 removed redundant method to tests tree | commitdiff
2019-01-09 Jim ProcterMerge branch 'feature/JAL-3063JAXB' into features/pca_j... tree | commitdiff
2019-01-09 Jim ProcterMerge branch 'feature/JAL-3063JAXB' into feature/JAL... tree | commitdiff
2019-01-09 Jim ProcterJAL-3063 remove stale JAXB binding POJO tree | commitdiff
2019-01-09 Ben SoaresJAL-3141 Added i18n for the example filenames in Prefer... tree | commitdiff
2019-01-09 Ben SoaresJAL-3141 forgot to add this file after extracting the... tree | commitdiff
2019-01-09 Ben SoaresJAL-3141 Made one more suggested change from code review tree | commitdiff
2019-01-08 Ben SoaresJAL-3141 Made some more suggested changes from code... tree | commitdiff
2019-01-08 Ben SoaresJAL-3141 Made some suggested changes from code review tree | commitdiff
2018-12-21 gmungocJAL-1767 minimise local variable scope tree | commitdiff
2018-12-20 Jim ProcterJAL-1767 port save/load PCA panel to JAXB - JAL-3063 tree | commitdiff
2018-12-20 Jim ProcterJAL-3171 JAL-3063 merge updates from JAL-1767 tree | commitdiff
2018-12-19 Jim ProcterMerge branch 'features/JAL-1767pcaInProject' into bug... tree | commitdiff
2018-12-19 gmungocJAL-2791 JAL-2808 correct Javadoc for api method tree | commitdiff
2018-12-17 Jim ProcterMerge branch 'bug/JAL-2864nullOverviewCanvas' into... tree | commitdiff
2018-12-17 Jim ProcterMerge branch 'bug/JAL-2750' into develop tree | commitdiff
2018-12-17 Jim ProcterMerge branch 'develop' into bug/JAL-2541cutRelocateFeatures tree | commitdiff
2018-12-14 Jim ProcterJAL-3171 record mapping between unmarshalled sequence... tree | commitdiff
2018-12-14 Jim ProcterJAL-3171 raise warning when a dataset reference exists... tree | commitdiff
2018-12-14 Jim ProcterJAL-3171 resolve dataset for imported projects via... tree | commitdiff
2018-12-14 Jim ProcterJAL-3171 register existing dataset for new view tree | commitdiff
2018-12-06 gmungocJAL-1854 fix Checkstyle import violations tree | commitdiff
2018-12-03 gmungocJAL-3063 Castor removed from codebase tree | commitdiff
2018-12-03 gmungocMerge branch 'feature/JAL-3063JAXB' into feature/JAL... tree | commitdiff
2018-11-05 Ben SoaresJAL-3141 couple of minor fixes for example files being... tree | commitdiff
2018-11-02 Ben SoaresJAL-3141 Tests now available and working, bringing... tree | commitdiff
2018-11-01 Ben SoaresJAL-3141 Preferences 'Backups' tab now fits. Moved... tree | commitdiff
2018-10-31 Ben SoaresJAL-3141 Preferences 'Backups' tab now working. Doesn... tree | commitdiff
2018-10-25 Ben SoaresJAL-3141 Ostensibly all backups working for alignment... tree | commitdiff
2018-10-24 Ben SoaresJAL-3141 Code checkout. Not compiling. tree | commitdiff
2018-10-24 Ben SoaresJAL-3141 Code checkout. Not compiling. tree | commitdiff
2018-10-23 Ben SoaresBackupFilter and other unfinished business tree | commitdiff
2018-10-22 Ben SoaresJAL-3141 Taken the backing up code out of FileChooser... tree | commitdiff
2018-10-22 Ben SoaresJAL-3141 Taken the backing up code out of FileChooser... tree | commitdiff
2018-10-22 Ben SoaresJAL-3141 Tidying tree | commitdiff
2018-10-19 Ben SoaresJAL-3141 Backup files being created with default suffix... tree | commitdiff
2018-09-28 gmungocJAL-3063 service param files read/saved using JAXB... tree | commitdiff
2018-09-28 gmungocJAL-3063 top level element added to JalviewWsParamSet.xsd tree | commitdiff
2018-09-24 gmungocJAL-3063 tidy commented out code tree | commitdiff
2018-09-21 gmungocJAL-3063 wrappers with check for null getting optional... tree | commitdiff
2018-09-20 gmungocJAL-2843 help text for colour by attribute, feature... tree | commitdiff
2018-09-19 gmungocJAL-3120 preserve plain colour value when changing... tree | commitdiff
2018-09-19 Jim ProcterJAL-2808 JAL-3026 deleted all commented out tab code... tree | commitdiff
2018-09-19 gmungocJAL-2808 JAL-3032 drop tabbed layout for Colours and... tree | commitdiff
2018-09-19 gmungocJAL-3063 use JAXB for 'Save as Project' and load projec... tree | commitdiff
2018-09-18 gmungocJAL-3063 Save/Load user defined colours using JAXB tree | commitdiff
2018-09-18 gmungocJAL-3063 Save/Load user colour scheme using JAXB tree | commitdiff
2018-09-18 gmungocJAL-3063 top level element added to colours schema... tree | commitdiff
2018-09-18 gmungocJAL-3063 New View via JAXB tree | commitdiff
2018-09-18 gmungocJAL-3063 temporary extra menu option to save/load proje... tree | commitdiff
2018-09-18 gmungocJAL-3063 first version of Jalview2XML using JAXB to... tree | commitdiff
2018-09-18 gmungocJAL-3063 JAXB binding classes generated by xjc from... tree | commitdiff
2018-09-17 gmungocJAL-3116 unit tests adapted to EMBL over JAXB tree | commitdiff
2018-09-14 gmungocJAL-3116 parse EMBL XML with JAXB (todo: update unit... tree | commitdiff
2018-09-13 gmungocJAL-3116 Uniprot XML unmarshalled using JAXB not Castor tree | commitdiff
2018-09-11 Jim ProcterMerge branch 'develop' into releases/Release_2_11_Branch tree | commitdiff
2018-09-09 Jim ProcterJAL-3106 normalise extension before checking if it... tree | commitdiff
2018-09-07 Jim ProcterJAL-3107 update any group associated annotation rows... tree | commitdiff
2018-09-07 Jim ProcterJAL-2988 if selected file is null (On Java 10/OSX ... tree | commitdiff
2018-09-07 Jim ProcterJAL-2988 workaround: overload getSelectedFile() because... tree | commitdiff
2018-09-07 Jim ProcterJAL-3106 use .jvp as default tree | commitdiff
2018-09-07 Jim ProcterJAL-3105 fix for focus transfer after window closed... tree | commitdiff
2018-09-06 Jim ProcterJAL-3091 code committed in error (failed patch for... tree | commitdiff
2018-09-06 Jim ProcterJAL-3091 release notes for JAL-3104 tree | commitdiff
2018-09-06 Jim ProcterJAL-3105 reallocate quality and consensus annotation... tree | commitdiff
2018-09-06 Jim ProcterJAL-2854 compute visible annotation panel height and... tree | commitdiff
2018-09-05 Jim ProcterMerge branch 'bug/JAL-3076ensemblGeneId' into develop tree | commitdiff
2018-09-05 Jim ProcterMerge branch 'bug/JAL-3065_DH_keyPair_Exception_nogroov... tree | commitdiff
2018-09-05 Jim ProcterJAL-3065 - amended commit 4906697ab6e5a79fbce3baae89f7... bug/JAL-3065_DH_keyPair_Exception_nogroovysettings tree | commitdiff
2018-09-03 Jim ProcterMerge branch 'patch/VAqua_saveload_update_JAL-2988... tree | commitdiff
2018-09-03 gmungocMerge branch 'trialMerge' into releases/Release_2_10_5_... tree | commitdiff
2018-09-03 gmungocJAL-3076 fetch Ensembl sequence as JSON instead of... tree | commitdiff
2018-09-03 Jim ProcterMerge branch 'bug/JAL-3065_DH_keyPair_Exception' into... tree | commitdiff
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