JAL-3205 faster calculation with symmetric score matrix
[jalview.git] / test /
2019-03-03 gmungocJAL-3205 faster calculation with symmetric score matrix
2019-03-01 gmungocMerge branch 'bug/JAL-2791exportFilteredFeature' into...
2019-03-01 gmungocMerge branch 'feature/JAL-3093wrappedModeTooltips'...
2019-03-01 gmungocJAL-3093 unit test adapts to actual number of annotatio... feature/JAL-3093wrappedModeTooltips
2019-03-01 gmungocMerge branch 'feature/JAL-3093wrappedModeTooltips'...
2019-03-01 gmungocMerge branch 'feature/JAL-1244stretchStatusMsg' into...
2019-03-01 gmungocMerge branch 'bug/JAL-3139colocatedFeatures' into develop
2019-03-01 gmungocMerge branch 'bug/JAL-3164complementOverview' into...
2019-03-01 gmungocMerge branch 'feature/intervalStoreJ' into merge/JAL...
2019-03-01 gmungocJAL-3140 reduced coupling to intervalstore.jar feature/intervalStoreJ
2019-02-28 gmungocMerge branch 'feature/JAL-3143ensemblJSON' into merge...
2019-02-28 gmungocMerge remote-tracking branch 'origin/feature/JAL-3141_b...
2019-02-28 Jim ProcterMerge branch 'feature/JAL-3141_backupfiles_for211'... merge/develop_feature/JAL-3141_backupfiles_for211
2019-02-26 gmungocJAL-3201 group colour schemes distinct instances
2019-02-25 gmungocJAL-3200 fast lookup of DSSP3 notation
2019-02-24 gmungocJAL-3198 SequenceGroup 'bulk constructor' without dupli...
2019-02-22 gmungocJAL-2738 don't set AF as feature score
2019-02-04 gmungocJAL-3143 update unit test for ID -> id change feature/JAL-3143ensemblJSON
2019-01-28 Ben SoaresJAL-3141 fixed test
2019-01-24 Ben SoaresJAL-3141 Eclipse re-formatting of file
2019-01-21 Ben SoaresJAL-3141 Fixed tests for new placement of suffix after...
2019-01-18 Jim ProcterMerge branch 'feature/JAL-3063jaxbNoCastor' into featur...
2019-01-18 Jim ProcterMerge branch 'develop' into feature/JAL-3063jaxbNoCastor
2019-01-17 Jim ProcterJAL-3116 clear out whitespace when materialising Sequen...
2019-01-16 Jim ProcterMerge branch 'feature/JAL-3063jaxbNoCastor' into develop
2019-01-16 Jim ProcterMerge branch 'features/pca_jaxb_datasetrefs_JAL-3171_JA...
2019-01-15 Jim ProcterJAL-1767 test that changing view association for PCA... features/pca_jaxb_datasetrefs_JAL-3171_JAL-3063_JAL-1767
2019-01-15 Jim ProcterJAL-1767 patch buggy PCA view association test
2019-01-09 Ben SoaresJAL-3141 removed redundant method to tests
2019-01-09 Jim ProcterJAL-1767 failing test to check if the PCA view associat...
2019-01-08 Ben SoaresJAL-3141 Made some suggested changes from code review
2019-01-03 gmungocJAL-1889 additional test for clover-added fields
2019-01-03 gmungocJAL-1889 ignore 'synthetic' fields added for jacoco
2018-12-19 Jim ProcterMerge branch 'features/JAL-1767pcaInProject' into bug...
2018-12-19 gmungocJAL-3178 include non-positional features in their group... bug/JAL-2791exportFilteredFeature
2018-12-17 Jim ProcterMerge branch 'bug/JAL-2864nullOverviewCanvas' into...
2018-12-17 Jim ProcterMerge branch 'bug/JAL-2750' into develop
2018-12-17 Jim ProcterMerge branch 'task/JAL-3174_fixed_filename_tests' into...
2018-12-17 Jim ProcterJAL-3174 backout un-needed stacktrace for exception...
2018-12-17 Ben SoaresJAL-3174 Merging in some test filename-case fixes
2018-12-17 Jim ProcterMerge branch 'develop' into bug/JAL-2541cutRelocateFeatures
2018-12-14 Jim ProcterJAL-3171 dataset reference tests now in Functional... bug/JAL-3171_maintain_datasets_across_views
2018-12-14 Jim ProcterJAL-3171 more complex project test - where sequences...
2018-12-14 Jim ProcterJAL-3171 failing test for legacy projects and fixing...
2018-12-14 Jim ProcterJAL-3171 failing test checking preservation of dataset
2018-12-03 gmungocJAL-3063 Castor removed from codebase
2018-12-03 gmungocMerge branch 'feature/JAL-3063JAXB' into feature/JAL...
2018-11-29 gmungocJAL-3140 NCList now via IntervalStore library
2018-11-28 gmungocJAL-3164 redraw complement overview on hide columns bug/JAL-3164complementOverview
2018-11-08 gmungocJAL-1889 ignore Clover instrumentation in test (second...
2018-11-08 gmungocJAL-1889 unit test tweaks for running on server
2018-11-05 Ben SoaresJAL-3141 Slightly improved message and more thorough...
2018-11-02 Ben SoaresJAL-3141 Tests now available and working, bringing...
2018-10-25 gmungocJAL-3143 unit tests updated for code changes!
2018-10-25 gmungocJAL-3143 comma-delimited feature attributes for alleles,
2018-10-23 gmungocJAL-3139 check group visibility when removing 'redundan... bug/JAL-3139colocatedFeatures
2018-10-05 gmungocJAL-1244 improved status message for insert/delete gap
2018-10-04 gmungocJAL-3132 status message for sequence and/or graph group...
2018-10-04 gmungocJAL-3093 unit tests, no mouse action over left/right...
2018-10-03 gmungocJAL-3093 tweaks to code and test for 3px gap above...
2018-10-02 gmungocJAL-3093 unit tests for SeqPanel.findMousePosition
2018-10-01 gmungocJAL-3093 refactor (+test) Annotation Labels tooltip...
2018-10-01 gmungocJAL-3093 unit tests for finding annotation row index...
2018-09-27 gmungocJAL-2791 refactored Export Features to apply all visibi...
2018-09-27 gmungocJAL-2791 new method to test if feature fails colour...
2018-09-27 gmungocJAL-2791 method that tests all conditions for feature...
2018-09-20 gmungocJAL-2843 help text for colour by attribute, feature...
2018-09-19 gmungocJAL-3063 unit test for save/load project switched to...
2018-09-17 gmungocJAL-3116 test method renamed to match code
2018-09-17 gmungocJAL-3116 unit tests adapted to EMBL over JAXB
2018-09-13 gmungocJAL-3116 Uniprot XML unmarshalled using JAXB not Castor
2018-09-11 Jim ProcterJAL-3112 increased TEST_TIMEOUT to 9000ms - needed...
2018-09-11 Jim ProcterJAL-3112 Use classgraph to reconstruct the classpath...
2018-09-11 Jim ProcterMerge branch 'develop' into releases/Release_2_11_Branch
2018-09-05 Jim ProcterJAL-3065 don’t quote class path args for Runtime.exec...
2018-09-05 Jim ProcterMerge branch 'bug/JAL-3065_DH_keyPair_Exception_nogroov...
2018-09-05 Jim ProcterJAL-3065 - amended commit 4906697ab6e5a79fbce3baae89f7... bug/JAL-3065_DH_keyPair_Exception_nogroovysettings
2018-09-03 gmungocMerge branch 'trialMerge' into releases/Release_2_10_5_...
2018-09-03 gmungocJAL-3076 fetch Ensembl sequence as JSON instead of...
2018-09-03 Jim ProcterMerge branch 'bug/JAL-3065_DH_keyPair_Exception' into...
2018-08-31 Jim ProcterMerge branch 'bug/JAL-3061_RNA_secondary_structure_anno...
2018-08-28 gmungocJAL-3087 include full alignment height in repeating...
2018-08-10 gmungocJAL-3076 refactor for more efficient scan of 'gene...
2018-08-10 gmungocJAL-3076 fetch Ensembl sequence as JSON instead of...
2018-08-03 Ben SoaresJAL-3061
2018-08-02 Ben SoaresJAL-3053
2018-07-31 bsoaresStockholm file for test
2018-07-17 bsoaresJAL-3065
2018-06-26 Jim ProcterJAL-3035 - jalview-das is no more !
2018-06-07 gmungocJAL-2920 format/comment tidy
2018-06-07 gmungocJAL-2920 wrap description in <html/> if it includes...
2018-06-06 gmungocJAL-2920 unit tests for 3 or more original or variant...
2018-06-06 Jim ProcterMerge branch 'bug/JAL-2920_uniprotvariantfeature' into...
2018-06-06 Jim ProcterJAL-2920 don’t output variant/original sequence as...
2018-06-06 Jim ProcterJAL-1920 JAL-3017 use newline not <br/> in description...
2018-06-04 gmungocJAL-2808 update test for revised treatment of 'mixed...
2018-06-04 gmungocJAL-3019 correctly form toRange of 'traversed' MapList
2018-06-04 Jim ProcterJAL-3017 parse multiple variant elements for uniprot...
2018-06-02 Jim ProcterJAL-3017 parse multiple variant elements for uniprot...
2018-05-28 gmungocMerge remote-tracking branch 'origin/releases/Release_2...
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