JAL-3484 unit test for restoring two views' annotation ordering
[jalview.git] / test /
2018-10-23 gmungocJAL-3139 check group visibility when removing 'redundan... bug/JAL-3139colocatedFeatures
2018-10-09 Jim ProcterJAL-3127 pass reference to AlignViewportI when creating...
2018-10-05 gmungocJAL-1244 improved status message for insert/delete gap
2018-10-04 gmungocJAL-3132 status message for sequence and/or graph group...
2018-10-04 gmungocJAL-3093 unit tests, no mouse action over left/right...
2018-10-03 gmungocJAL-3093 tweaks to code and test for 3px gap above...
2018-10-02 gmungocJAL-3093 unit tests for SeqPanel.findMousePosition
2018-10-01 gmungocJAL-3093 refactor (+test) Annotation Labels tooltip...
2018-10-01 gmungocJAL-3093 unit tests for finding annotation row index...
2018-09-27 gmungocJAL-2791 refactored Export Features to apply all visibi...
2018-09-27 gmungocJAL-2791 new method to test if feature fails colour...
2018-09-27 gmungocJAL-2791 method that tests all conditions for feature...
2018-09-21 gmungocJAL-3120 preserve feature colour/mincolour/maxcolour... bug/JAL-3120restoreFeatureColour
2018-09-20 gmungocJAL-2843 help text for colour by attribute, feature...
2018-09-19 gmungocJAL-3063 unit test for save/load project switched to...
2018-09-18 Jim ProcterJAL-3035 more dedasification
2018-09-17 gmungocJAL-3116 test method renamed to match code
2018-09-17 gmungocJAL-3116 unit tests adapted to EMBL over JAXB
2018-09-13 gmungocJAL-3116 Uniprot XML unmarshalled using JAXB not Castor
2018-09-11 Jim ProcterJAL-3112 increased TEST_TIMEOUT to 9000ms - needed...
2018-09-11 Jim ProcterJAL-3112 Use classgraph to reconstruct the classpath...
2018-09-11 Jim ProcterMerge branch 'develop' into releases/Release_2_11_Branch
2018-09-10 gmungocJAL-3099 use Alignment.getVisibleWidth() where wanted bug/JAL-3099alignmentVisibleWidth
2018-09-05 Jim ProcterJAL-3065 don’t quote class path args for Runtime.exec...
2018-09-05 Jim ProcterMerge branch 'bug/JAL-3065_DH_keyPair_Exception_nogroov...
2018-09-05 Jim ProcterJAL-3065 - amended commit 4906697ab6e5a79fbce3baae89f7... bug/JAL-3065_DH_keyPair_Exception_nogroovysettings
2018-09-03 gmungocMerge branch 'trialMerge' into releases/Release_2_10_5_...
2018-09-03 gmungocJAL-3076 fetch Ensembl sequence as JSON instead of...
2018-09-03 Jim ProcterMerge branch 'bug/JAL-3065_DH_keyPair_Exception' into...
2018-08-31 Jim ProcterMerge branch 'bug/JAL-3061_RNA_secondary_structure_anno...
2018-08-28 gmungocJAL-3087 include full alignment height in repeating...
2018-08-16 gmungocJAL-3082 one more test condition bug/JAL-3082selectRegex
2018-08-16 gmungocJAL-3082 handle regex error, exclusive threshold, unit...
2018-08-10 gmungocJAL-3076 refactor for more efficient scan of 'gene...
2018-08-10 gmungocJAL-3076 fetch Ensembl sequence as JSON instead of...
2018-08-03 Ben SoaresJAL-3061
2018-08-02 Ben SoaresJAL-3053
2018-07-31 bsoaresStockholm file for test
2018-07-17 bsoaresJAL-3065
2018-06-29 gmungocJAL-3049 JAL-2069 colour icon tooltip including by...
2018-06-26 Jim ProcterJAL-3035 - jalview-das is no more !
2018-06-07 gmungocJAL-2920 format/comment tidy
2018-06-07 gmungocJAL-2920 wrap description in <html/> if it includes...
2018-06-06 gmungocJAL-2920 unit tests for 3 or more original or variant...
2018-06-06 Jim ProcterMerge branch 'bug/JAL-2920_uniprotvariantfeature' into...
2018-06-06 Jim ProcterJAL-2920 don’t output variant/original sequence as...
2018-06-06 Jim ProcterJAL-1920 JAL-3017 use newline not <br/> in description...
2018-06-04 gmungocJAL-2808 update test for revised treatment of 'mixed...
2018-06-04 gmungocJAL-3019 correctly form toRange of 'traversed' MapList
2018-06-04 Jim ProcterJAL-3017 parse multiple variant elements for uniprot...
2018-06-02 Jim ProcterJAL-3017 parse multiple variant elements for uniprot...
2018-05-28 gmungocMerge remote-tracking branch 'origin/releases/Release_2...
2018-05-24 gmungocJAL-2997 additional tests
2018-05-23 gmungocJAL-2997 unit test
2018-05-21 gmungocJAL-2920 use HGVS notation for protein variant feature
2018-05-11 gmungocJAL-2986 additional asserts for SequenceCursor updates
2018-05-11 gmungocJAL-2986 failing test added
2018-05-10 Jim ProcterMerge branch 'bug/JAL-2920_uniprotvariantfeature' into...
2018-05-10 Jim ProcterJAL-2920 basic test for Description from features with...
2018-05-07 Jim ProcterJAL-2321 patch test to ensure structures are actually... patch/JAL-2321_addsecstrForDroppedPDBFile
2018-05-07 gmungocJAL-2808 ensure test setUp/tearDown alwaysRun
2018-05-07 gmungocMerge branch 'releases/Release_2_10_4_Branch' into...
2018-05-07 gmungocJAL-1767 unit test for save and restore PCA features/JAL-1767pcaInProject
2018-05-07 Jim ProcterJAL-2906 apply GPLv3 license source
2018-05-04 gmungocJAL-2965 graduate brightness on z-axis from centre...
2018-05-01 gmungocJAL-1767 include d and e vectors in Matrix.copy()
2018-04-30 gmungocJAL-2965 graduated sequence point colour from back...
2018-04-27 gmungocJAL-1767 refactoring and tidying of RotatableCanvas...
2018-04-26 gmungocJAL-2962 remove Change Parameters menu from PCA panel
2018-04-26 gmungocJAL-2962 option to offer BLOSUM62 for nucleotide PCA
2018-04-25 Jim ProcterMerge branch 'features/JAL-2944_openStructuresInSelecte...
2018-04-23 gmungocJAL-2952 set negative TempFactor values as AlignmentAnn...
2018-04-18 gmungocMerge branch 'releases/Release_2_10_4_Branch' into...
2018-04-18 gmungocJAL-2593 render 'duplicate' features if transparency...
2018-04-12 gmungocJAL-2223 don't add duplicate mappings to StructureSelec...
2018-04-12 gmungocJAL-2944 tidies for review comments
2018-04-06 Jim Procterfailing test for JAL-2223
2018-04-05 Jim ProcterJAL-2945 failing test for structure mapping
2018-04-05 Jim ProcterJAL-2945 formatting
2018-03-22 gmungocJAL-2929 unit test, tidy unused/unneeded fields/parameters
2018-03-21 Jim ProcterJAL-2754 reinstate PA import from bad conflict merge
2018-03-21 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into...
2018-03-21 Jim ProcterJAL-2754 don’t use deprecated api for getting font...
2018-03-19 gmungocJAL-2620 parse genetic code tables from standard file...
2018-03-16 gmungocJAL-2620 alternative genetic code translation tables
2018-03-16 gmungocMerge remote-tracking branch 'origin/releases/Release_2...
2018-03-15 gmungocJAL-2893 enabling Get Crossreferences to ENSEMBLGENOMES
2018-03-14 gmungocJAL-2933 pass viewport in Finder constructor, find... bug/JAL-2839findWithHidden
2018-03-14 gmungocJAL-2933 gui and applet Finder hold a FinderI per viewport
2018-03-13 gmungocJAL-2839 additional test case
2018-03-13 gmungocJAL-2839 refactored analysis.Finder and tests
2018-03-13 gmungocJAL-2839 addResult ignores duplicates
2018-03-09 gmungocJAL-2839 Finder refactoring prior to fixing the defect
2018-03-08 gmungocMerge remote-tracking branch 'origin/releases/Release_2... merges/JAL-2906_update2_11_from_2_10_4
2018-03-08 gmungocJAL-2885 tests updated for code changes
2018-03-07 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into...
2018-02-27 Jim ProcterMerge branch 'feature/JAL-2759' into merge/JAL-2759_2104
2018-02-23 Jim ProcterMerge branch 'features/JAL-2885UniprotHttps' into relea...
2018-02-22 Jim ProcterMerge branch 'bug/JAL-2666' into releases/Release_2_10_...
2018-02-20 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into...
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