Revert "JAL-3690 for a laugh, lets enable web services!"
[jalview.git] / test /
2020-10-21 Mateusz WarownyJAL - 3690 AlignCalc rebuilt - FutureTask-based manager
2020-07-15 Mateusz WarownyJAL-3690 refactoring web-services discovery
2020-07-09 Mateusz WarownyMerge branch 'feature/JAL-3686_slivka_client_js_update... alpha/merge_212_JalviewJS_2112
2020-05-18 Jim ProcterMerge branch 'alpha/JAL-3362_Jalview_212_alpha' into...
2020-05-18 gmungocJAL-3529 test updated for revised signature of getDBRefs()
2020-05-18 gmungocMerge branch 'Jalview-JS/develop' into develop
2020-05-01 gmungocJAL-3613 check sequence overlap when matching search...
2020-04-23 Jim ProcterMerge branch 'develop' into alpha/JAL-3362_Jalview_212_...
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3574filterByPOS' into documentati...
2020-04-21 gmungocJAL-3210 try adding setup method to unit test failing...
2020-04-21 gmungocJAL-1889 corrected wait for consensus to be calculated
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3567virtualFeatureCoordinates...
2020-04-21 Jim ProcterJAL-3567 translated rather than imputed peptide
2020-04-17 gmungocJAL-3567 unit tests for linked feature tooltips
2020-04-16 gmungocJAL-3567 adjust layout of linked feature report, unit...
2020-04-16 gmungocJAL-3567 report mapped location for virtual features...
2020-04-14 Jim ProcterMerge branch 'bug/JAL-3529_uniprotidsinstockholm' into...
2020-04-14 Jim ProcterJAL-3529 revert ordering of DBRef addition so it reflec...
2020-04-14 Jim ProcterJAL-3597 improved Memory test suite by detecting base...
2020-04-13 gmungocJAL-3574 test coverage corners bug/JAL-3574filterByPOS
2020-04-13 gmungocJAL-3574 Matcher with integer/long value pattern (e...
2020-03-31 gmungocMerge branch 'develop' into Jalview-JS/develop
2020-03-31 gmungocJAL-1889 better (?) wait for Conservation thread
2020-03-30 gmungocJAL-3210 test updated for changed signature of Sequence...
2020-03-30 gmungocMerge branch 'develop' into Jalview-JS/develop
2020-03-20 Jim ProcterJAL-3562 exclude testNG groups from a build via -Ptestn...
2020-03-09 gmungocJAL-3528 unit tests added for failed lookup, Javadoc
2020-03-06 gmungocJAL-3187 unit test for findComplementFeaturesAtResidue
2020-03-06 gmungocMerge branch 'feature/JAL-3468featureDescriptionEllipsi...
2020-03-06 gmungocJAL-3468 i18n and additional unit tests feature/JAL-3468featureDescriptionEllipsis
2020-03-06 Ben SoaresJAL-3529 improved regex in Stockholm UNIPROT accession...
2020-03-04 Ben SoaresJAL-3468 Fixed tests and added test for max-length...
2020-02-27 Jim ProcterJAL-3412 patch for failing test
2020-02-27 Jim ProcterMerge branch 'bug/JAL-3412idWidthDiscrepancy' into... bug/JAL-3412idWidthDiscrepancy
2020-02-27 Jim ProcterMerge branch 'bug/JAL-3296changeStartInvalidateCursor...
2020-02-18 Ben SoaresJAL-3449 merge from develop
2020-02-18 Jim ProcterJAL-3529 test for AC <Uniprot/EMBL> rather than DR...
2020-02-18 Jim ProcterJAL-3529 assert Uniprot refs must be provided as primar...
2020-02-17 Ben SoaresJAL-3341 Increase number of lines looked at by test...
2020-02-17 Jim ProcterJAL-3536 failing test and test data
2020-02-14 Jim ProcterJAL-3531 failing test
2020-02-14 Jim ProcterJAL-3529 more detailed asserts to detect whitespace...
2020-02-14 Jim ProcterJAL-3529 failing test for bug
2020-02-04 MMWarownyJAL-3515 Extract core WSDiscoverer methods to a separat...
2020-01-29 Ben SoaresJAL-3341 Increase number of lines looked at by test...
2020-01-28 gmungocJAL-3341 debug for failing unit test bug/JAL-3341unitTestFails
2020-01-28 gmungocMerge branch 'feature/JAL-3121gffAttributeMap' into...
2020-01-24 gmungocJAL=3121 more data format validation/tests, help text... feature/JAL-3121gffAttributeMap
2020-01-23 gmungocJAL-3121 'attributes map' in GFF3 without special ...
2020-01-16 Jim ProcterMerge branch 'improvement/JAL-3449_add_install4j_instal...
2019-12-12 Jim ProcterJAL-2305 moved failing CrossRef tests to Functional_Fai...
2019-11-18 Ben SoaresJAL-3477 New sensible default decisions on memory,...
2019-11-01 gmungocJAL-3468 unit tests updated for changes
2019-10-10 Ben SoaresJAL-3210 Two fixed tests (previously not compiling)
2019-10-10 Ben SoaresJAL-3210 Two fixed tests (previously not compiling)
2019-10-08 gmungocMerge branch 'develop' into Jalview-JS/develop
2019-10-07 Jim ProcterJAL-3070 jaba/slivka independent tests for disorder...
2019-10-03 Jim ProcterJAL-3070 test jabaws and slivka AACon service functionality
2019-10-03 Jim ProcterJAL-3070 basic AACon service functionality test
2019-10-02 Jim ProcterJAL-3070 discoverers return ServiceWithParameter, now...
2019-09-26 Jim ProcterJAL-3070 allow SequenceI.findPositions(0,column+1)...
2019-09-26 Jim ProcterJAL-3070 JAL-3066 AlignmentI.findOrAddAnnotation(Alignm...
2019-09-23 Jim ProcterJAL-3070 rename AbstractJabaCalcWorker to SeqAnnotation...
2019-09-20 Jim ProcterJAL-3070 rough-and-ready refactor of JABA SequenceAnnot...
2019-09-20 Jim ProcterJAL-3070 JAL-2507 fix up test output and honour the...
2019-08-22 gmungocJAL-3121 slightly cleaner parsing of, and unit test...
2019-08-22 gmungocMerge branch 'develop' into feature/JAL-3121gffAttributeMap
2019-08-22 gmungocJAL-3187 case-insensitive codon variant calculation
2019-08-22 gmungocJAL-3121 round trip GFF attributes including map-valued...
2019-08-19 gmungocJAL-3412 calculateIdWidth - more consistency, constants...
2019-08-13 Jim ProcterMerge branch 'alpha/JAL-3362_Jalview_212_alpha' into...
2019-08-09 gmungocJAL-3187 removal of variant feature (non-virtual) trans...
2019-07-26 gmungocMerge branch 'features/JAL-3375vcfValidation' into
2019-07-26 gmungocJAL-1793 only decode specific special characters in...
2019-07-26 gmungocJAL-3376 capture VCF POS, ID, QUAL, FILTER as feature... features/JAL-3375vcfValidation
2019-07-26 gmungocJAL-3375 format validate VCF Integer and Float fields
2019-07-25 gmungocJAL-3375 ignore '.' values for VCF data
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge
2019-07-10 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures
2019-07-10 Jim ProcterMerge branch 'tasks/JAL-3070_wsinterfaces' into alpha...
2019-07-10 Jim ProcterMerge branch 'merge/JAL-3285_mchmmer_with_211_develop...
2019-07-08 gmungocJAL-3187 derived peptide variants tweaks and tests
2019-07-05 gmungocJAL-1793 apply URL decoding when saving VCF attribute...
2019-06-26 Jim ProcterJAL-3332 test to check for duplicate db sources and...
2019-06-26 Jim ProcterJAL-3330 JAL-3332 relocate and simplify BeforeClass...
2019-06-26 Jim ProcterJAL-3330 test to verify sub/attributeName array is...
2019-06-18 Jim ProcterMerge branch 'bug/JAL-2830_editManglesDatasetSequence...
2019-06-18 gmungocJAL-3304 option to export linked features in Jalview...
2019-06-17 gmungocJAL-2792 JAL-3187 linked features (if shown) in Feature...
2019-06-17 gmungocJAL-3187 update alignAs code and unit tests for 'shared...
2019-06-17 gmungocJAL-3187 update unit test - protein variants not now...
2019-06-17 gmungocJAL-3187 add sequence to feature details table (and...
2019-06-14 gmungocJAL-3302 transfer visible 'linked' features to Chimera
2019-06-10 gmungocJAL-3296 ensure sequence cursor reset when sequence... bug/JAL-3296changeStartInvalidateCursor
2019-06-07 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures
2019-06-07 tvaJAL-3291 issue fixed, passing tests added
2019-06-07 gmungocJAL-2738 use GeneLocus extends DBRefEntry to hold chrom...
2019-06-07 tvaJAL-3285 fix errors in tests introduced by merge
2019-06-06 gmungocJAL-3187 deletions (of Castor code) after merge from...
2019-06-06 gmungocMerge branch 'develop' into trialMerge
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