git://source.jalview.org / jalview.git / search
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
JAL-1551 formatting applied
2015-01-07 gmungocJAL-1551 formatting applied
 commit | commitdiff | tree
2015-01-07 gmungocJAL-1588 refactoring to StructureViewerBase and related
 commit | commitdiff | tree
2015-01-06 gmungocJAL-1588 refactoring prior to 'save Chimera project'
 commit | commitdiff | tree
2014-12-28 gmungocMerge branch 'features/JAL-1596ChimeraREST' into develop
 commit | commitdiff | tree
2014-12-09 gmungocJAL-1616 loading of datasets from XML patched
 commit | commitdiff | tree
2014-12-05 gmungocJAL-1614 flag 'protein' removed
 commit | commitdiff | tree
2014-12-05 gmungocJAL-1614 flag 'protein' removed
 commit | commitdiff | tree
2014-12-05 gmungocJAL-1609 refactored colour by sequence command, now...
commit | commitdiff | tree
2014-12-05 gmungocMerge branch 'Release_2_8_2_Branch' of local repository...
commit | commitdiff | tree
2014-12-03 gmungocMerge branch 'Release_2_8_2_Branch' of https://source...
commit | commitdiff | tree
2014-12-03 gmungocJAL-1609 wip on Chimera colour by sequence
 commit | commitdiff | tree
2014-12-01 gmungocJAL-429 Phylip added to help page
 commit | commitdiff | tree
2014-12-01 gmungocJAL-1544 typos/formatting in help (and Phylip added)
 commit | commitdiff | tree
2014-11-28 gmungocJAL-1610 check reference annotations against alignment...
commit | commitdiff | tree
2014-11-28 gmungocJAL-1596 first REST interface coded
 commit | commitdiff | tree
2014-11-27 gmungocJAL-1603 if Chimera selected in Preferences, warn if...
commit | commitdiff | tree
2014-11-27 gmungocMerge branch 'Release_2_8_2_Branch' of https://source...
commit | commitdiff | tree
2014-11-27 gmungocMerge branch 'Release_2_8_2_Branch' of https://source...
commit | commitdiff | tree
2014-11-26 gmungocJAL-1528 NullPointer check / more informative PDB fetch...
commit | commitdiff | tree
2014-11-25 gmungocJFAL-1594 fix Undo bug; enum EditCommand.Action; basic...
commit | commitdiff | tree
2014-11-21 gmungocJAL-1528 found and readded Colour by Chain ('rainbow...
commit | commitdiff | tree
2014-11-21 gmungocMerge branch 'Release_2_8_2_Branch' of https://source...
commit | commitdiff | tree
2014-11-19 gmungocJAL-1342 new command-line parameter -jabaws <URL>
 commit | commitdiff | tree
2014-11-18 gmungocJAL-1349 rebuild Web Service menu after add/delete...
commit | commitdiff | tree
2014-11-18 gmungocJAL-1582 removing finalize() as may have unexpected...
commit | commitdiff | tree
2014-11-18 gmungocJAL-1582 quicker tooltip on service presets (and code...
commit | commitdiff | tree
2014-11-18 gmungocJAL-1349 refresh menu presets after 'create' new
 commit | commitdiff | tree
2014-11-18 gmungocJAL-1580 Chimera path tooltip, removed focusListener
 commit | commitdiff | tree
2014-11-18 gmungocMerge branch 'Release_2_8_2_Branch' of https://source...
commit | commitdiff | tree
2014-11-17 gmungocJAL-1573 unit test added to verify Help target enum...
commit | commitdiff | tree
2014-11-17 gmungocJAL-1581 Tooltip slimmed down, Help button added on...
commit | commitdiff | tree
2014-11-17 gmungocJAL-1293 hide/show sequence annotations with hide/reveal...
commit | commitdiff | tree
2014-11-17 gmungocJAL-1586 chimera file chooser added, validate on OK...
commit | commitdiff | tree
2014-11-17 gmungocJAL-1580 size parameters dialog to height of Desktop
 commit | commitdiff | tree
2014-11-14 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2014-11-14 gmungocJAL-1528 Chimera Help doc + fixes to setting colours
 commit | commitdiff | tree
2014-11-13 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2014-11-13 gmungocmerge
 commit | commitdiff | tree
2014-11-13 gmungocJAL-1528 new Preference CHIMERA_PATH (Preferences ...
commit | commitdiff | tree
2014-11-13 gmungocJAL-1528 Chimera tidy errors, focus after align, close...
commit | commitdiff | tree
2014-11-12 gmungocJAL-1528 bug fixes and adjustments to Chimera interface
 commit | commitdiff | tree
2014-11-12 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2014-11-11 gmungocJAL-1527 opening a project saved with JMol should use...
commit | commitdiff | tree
2014-11-06 gmungocJAL-1152 use a proper RadioButton not a faked one
 commit | commitdiff | tree
2014-11-05 gmungocJAL-674 Prefences tweaks incl help documentation for...
commit | commitdiff | tree
2014-11-05 gmungocJAL-1152 new Structure tab on Preferences for SS derivation...
commit | commitdiff | tree
2014-11-04 gmungocJAL-1152 help updates for Preferences
 commit | commitdiff | tree
2014-11-04 gmungocJAL-1152 annotation sort algorithm optimisation
 commit | commitdiff | tree
2014-11-03 gmungocMerge branch 'features/JAL-1152annotationSorting' of...
commit | commitdiff | tree
2014-11-03 gmungocJAL-1152 annotation sorting preferences and help documentation
 commit | commitdiff | tree
2014-10-31 gmungocJAL-1152 bug fix for 'no sort' case + tests for autocalc...
commit | commitdiff | tree
2014-10-31 gmungocJAL-1152 menu tweaks plus new option to put Autocalc...
commit | commitdiff | tree
2014-10-30 gmungocJAL-1152 with sticky annotation sort order that updates...
commit | commitdiff | tree
2014-10-30 gmungocJAL-1152 prototype of new Annotations menu with sort...
commit | commitdiff | tree
2014-10-28 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2014-10-28 gmungocJAL-1264 refactor to add menu options to _both_ sequence...
commit | commitdiff | tree
2014-10-23 gmungocJAL-1264 new unit tests
 commit | commitdiff | tree
2014-10-23 gmungocJAL-1264 further refactoring and tests
 commit | commitdiff | tree
2014-10-22 gmungocJAL-1304 repositioned tab to correct example
 commit | commitdiff | tree
2014-10-13 gmungocJAL-1264 unneeded setup removed
 commit | commitdiff | tree
2014-10-13 gmungocJAL-1264 unit test corrected
 commit | commitdiff | tree
2014-10-12 gmungocJAL-1544 SEQENCE -> SEQUENCE
 commit | commitdiff | tree
2014-10-12 gmungocJAL-1264 help updates for show/hide annotations on
 commit | commitdiff | tree
2014-10-10 gmungocJAL-1551 project-specific settings
 commit | commitdiff | tree
2014-10-10 gmungocJAL-1551 proposed project settings for code cleanup...
commit | commitdiff | tree
2014-10-10 gmungocJAL-1264 unit tests
 commit | commitdiff | tree
2014-10-10 gmungocSuppressed test that needs user interaction to allow...
commit | commitdiff | tree
2014-10-10 gmungocJAL-1551 CRLF handling
 commit | commitdiff | tree
2014-10-10 gmungocJAL-1264 show/hide annotations, plus merged changes
 commit | commitdiff | tree
2014-10-10 gmungocJAL-1481 wrap tooltip in html
 commit | commitdiff | tree
2014-10-10 gmungocJAL-1264 added getAlignmentAnnotations(calcId, label)
 commit | commitdiff | tree
2014-10-10 gmungocJAL-1264 reverted (removed added method)
 commit | commitdiff | tree
2014-10-08 gmungocMerge branch 'Release_2_8_2_Branch' into
 commit | commitdiff | tree
2014-10-07 gmungocJAL-1264 wip
 commit | commitdiff | tree
2014-10-07 gmungocJAL-1554 handle left-then-right click on sequence id
 commit | commitdiff | tree
2014-10-03 gmungocJAL-1264 javadoc update
 commit | commitdiff | tree
2014-10-03 gmungocJAL-1264 show/hide annotations; JAL-1481 Find tooltip
 commit | commitdiff | tree
2014-10-03 gmungocJAL-1506 delete all warning; JAL-1264 show/hide annotations
 commit | commitdiff | tree
2014-10-03 gmungocJAL-1264 refactored show/hide annotation types including...
commit | commitdiff | tree
2014-10-03 gmungocJAL-1481 search expression validation
 commit | commitdiff | tree
2014-10-03 gmungocJAL-1506 correct exit on close align frame
 commit | commitdiff | tree
2014-10-03 gmungocJAL-914 don't open help window twice
 commit | commitdiff | tree
2014-10-03 gmungocJAL-1264 show/hide annotations, JAL-1481 search validation...
commit | commitdiff | tree
2014-09-25 gmungocJAL-1264 tidy up use of MouseListener for showHideAnnotations
 commit | commitdiff | tree
2014-09-25 gmungocJAL-1264 alternative (popup menu) way to show/hide...
commit | commitdiff | tree
2014-09-24 gmungocJAL-1264 further refactoring of panel + unit tests
 commit | commitdiff | tree
2014-09-23 gmungocJAL-1264 first cut of panel for annotation show/hide...
commit | commitdiff | tree
2014-09-18 gmungocMerge branch 'JAL-1360_Branch' into Release_2_8_2_Branch
 commit | commitdiff | tree
2014-09-18 gmungocMerge branch 'Release_2_8_2_Branch' of https://source...
commit | commitdiff | tree
2014-09-18 gmungocJAL-1360 tweaks to match help page conventions, size...
commit | commitdiff | tree
2014-09-18 gmungocJAL-1360 consistent (bold) help page headings
 commit | commitdiff | tree
2014-09-18 gmungocJAL-1360 Javadoc, Vector replaced with ArrayList, code...
commit | commitdiff | tree
2014-09-18 gmungocJAL-1360 Javadoc/JUnit
 commit | commitdiff | tree
2014-09-18 gmungocJAL-1360 refactored utility method to ColorUtils class
 commit | commitdiff | tree
2014-09-18 gmungocJAL-1544 it's --> its
 commit | commitdiff | tree
2014-09-17 gmungocJAL-1360 updates to online help for user define colour...
commit | commitdiff | tree
2014-09-17 gmungocCorrect colour for text when colour set
 commit | commitdiff | tree
2014-09-17 gmungocJAL-1360 refactored for consistent lighter/darker for
 commit | commitdiff | tree
2014-09-17 gmungocJAL-1360 workaround for user defined colours display...
commit | commitdiff | tree
2014-09-15 gmungocJAL-1542 script to show aligned positions of selected...
commit | commitdiff | tree
next