git://source.jalview.org / jalview.git / search
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
JAL-3690 update j2s from hanson1 branch 0b8b02bb
2020-11-30 Jim ProcterJAL-3690 update j2s from hanson1 branch 0b8b02bb
 commit | commitdiff | tree
2020-05-18 Jim ProcterMerge branch 'alpha/JAL-3362_Jalview_212_alpha' into...
commit | commitdiff | tree
2020-04-23 Jim ProcterMerge branch 'develop' into alpha/JAL-3362_Jalview_212_alpha
 commit | commitdiff | tree
2020-04-23 Jim ProcterMerge branch 'alpha/JAL-3066_Jalview_212_slivka-integration...
commit | commitdiff | tree
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
commit | commitdiff | tree
2020-04-21 Jim ProcterJAL-3407 add GPL license to Jalview source files
 commit | commitdiff | tree
2020-04-21 Jim ProcterJAL-3407 release notes - JAL-247 - for auto-set-ID...
commit | commitdiff | tree
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
commit | commitdiff | tree
2020-04-21 Jim ProcterJAL-3407 fix JAL-3574 - remove from known issues for...
commit | commitdiff | tree
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
commit | commitdiff | tree
2020-04-21 Jim ProcterJAL-3574 JAL-3407 release notes
 commit | commitdiff | tree
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3574filterByPOS' into documentation...
commit | commitdiff | tree
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
commit | commitdiff | tree
2020-04-21 Jim ProcterJAL-3407 add and document ComputePeptideVariants.groovy
 commit | commitdiff | tree
2020-04-21 Jim ProcterMerge branch 'develop' of http://source.jalview.org...
commit | commitdiff | tree
2020-04-21 Jim ProcterJAL-3567 JAL-3407 document sequence features report...
commit | commitdiff | tree
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3567virtualFeatureCoordinates...
commit | commitdiff | tree
2020-04-21 Jim ProcterJAL-367 code tidy
 commit | commitdiff | tree
2020-04-21 Jim ProcterJAL-3567 translated rather than imputed peptide
 commit | commitdiff | tree
2020-04-14 Jim ProcterJAL-3407 JAL-3529 release notes
 commit | commitdiff | tree
2020-04-14 Jim ProcterMerge branch 'bug/JAL-3529_uniprotidsinstockholm' into...
commit | commitdiff | tree
2020-04-14 Jim ProcterJAL-3529 revert ordering of DBRef addition so it reflects...
commit | commitdiff | tree
2020-04-14 Jim ProcterJAL-3597 improved Memory test suite by detecting base...
commit | commitdiff | tree
2020-04-14 Jim ProcterJAL-3407 release date set to 16th April, known issue...
commit | commitdiff | tree
2020-04-14 Jim ProcterMerge branch 'testing/JAL-3577_jalviewversion_autoset_fixed...
commit | commitdiff | tree
2020-04-09 Jim ProcterJAL-3577 automatically configure JALVIEW_VERSION for...
commit | commitdiff | tree
2020-04-06 Jim ProcterJAL-3407 redact java 8 incompatible type inference
 commit | commitdiff | tree
2020-04-06 Jim ProcterJAL-3407 updated release date to Thursday 9th April...
commit | commitdiff | tree
2020-03-31 Jim ProcterMerge branch 'documentation/Release_2_11_1_Branch'...
commit | commitdiff | tree
2020-03-31 Jim ProcterJAL-3407 basic doc for releasing jalview - will be...
commit | commitdiff | tree
2020-03-31 Jim ProcterJAL-3407 updated release date to 2nd April, and first...
commit | commitdiff | tree
2020-03-31 Jim ProcterMerge branch 'documentation/Release_2_11_1_Branch'...
commit | commitdiff | tree
2020-03-30 Jim ProcterJAL-3407 2.11.1.0 release date bump - maybe tomorrow...
commit | commitdiff | tree
2020-03-30 Jim ProcterJAL-3407 JAL-3130 back out java 9+ syntax that breaks...
commit | commitdiff | tree
2020-03-20 Jim ProcterJAL-3562 exclude testNG groups from a build via -PtestngExcl...
commit | commitdiff | tree
2020-03-20 Jim ProcterJAL-3407 JAL-3562 release notes
 commit | commitdiff | tree
2020-03-20 Jim ProcterJAL-3407 rejigging new features - simplify release...
commit | commitdiff | tree
2020-03-20 Jim ProcterJAL-3407 reformat releases.html
 commit | commitdiff | tree
2020-03-20 Jim ProcterJAL-3407 JAL-3549 javadoc
 commit | commitdiff | tree
2020-03-20 Jim ProcterJAL-3407 - release notes for JAL-3547
 commit | commitdiff | tree
2020-03-20 Jim ProcterJAL-3549 javadoc
 commit | commitdiff | tree
2020-03-16 Jim ProcterJAL-3407 JAL-3187 help documentation for virtual features...
commit | commitdiff | tree
2020-03-16 Jim ProcterJAL-3407 JAL-3549 explicitly mention the ‘no features...
commit | commitdiff | tree
2020-03-16 Jim ProcterJAL-3407 group together ‘virtual feature’ related features...
commit | commitdiff | tree
2020-03-16 Jim ProcterMerge branch 'develop' of http://source.jalview.org...
commit | commitdiff | tree
2020-03-05 Jim ProcterMerge branch 'improvement/JAL-3543_dont_report_null_versions...
commit | commitdiff | tree
2020-03-03 Jim ProcterMerge branch 'groovy/JAL-3547_conservationsequenceexport...
commit | commitdiff | tree
2020-03-03 Jim ProcterJAL-3547 groovy script to get the conservation sequence...
commit | commitdiff | tree
2020-03-02 Jim ProcterJAL-3407 redact Java 8 incompatible '<>' with anonymous...
commit | commitdiff | tree
2020-02-27 Jim ProcterMerge branch 'bug/JAL-3412idWidthDiscrepancy' into...
commit | commitdiff | tree
2020-02-27 Jim ProcterJAL-3407 release notes for JAL-3412
 commit | commitdiff | tree
2020-02-27 Jim ProcterJAL-3412 patch for failing test
 commit | commitdiff | tree
2020-02-27 Jim ProcterMerge branch 'bug/JAL-3412idWidthDiscrepancy' into...
commit | commitdiff | tree
2020-02-27 Jim ProcterJAL-3407 JAL-3296 release notes
 commit | commitdiff | tree
2020-02-27 Jim ProcterMerge branch 'bug/JAL-3296changeStartInvalidateCursor...
commit | commitdiff | tree
2020-02-26 Jim ProcterJAL-3477 jalview.jvmmemmax / jvmmemmax maximum value...
commit | commitdiff | tree
2020-02-26 Jim ProcterMerge branch 'bug/JAL-3477_memory_max_allocation' into...
commit | commitdiff | tree
2020-02-26 Jim ProcterJAL-3407 release notes for JAL-3449 JAL-3393 JAL-3420...
commit | commitdiff | tree
2020-02-26 Jim ProcterMerge branch 'improvement/JAL-3449_add_install4j_installer_g...
commit | commitdiff | tree
2020-02-26 Jim ProcterJAL-3541 docs for enabling OpenClover coverage reports...
commit | commitdiff | tree
2020-02-26 Jim ProcterJAL-3541 removed clover report generation debug flag...
commit | commitdiff | tree
2020-02-26 Jim ProcterJAL-3541 configurables for clover report generation...
commit | commitdiff | tree
2020-02-25 Jim ProcterJAL-3541 track own jalview.gui.Desktop clover source...
commit | commitdiff | tree
2020-02-25 Jim ProcterJAL-3541 2g heap for clover xml and clover html - remove...
commit | commitdiff | tree
2020-02-25 Jim ProcterJAL-3541 add verbose and heap setting for HTML Report...
commit | commitdiff | tree
2020-02-25 Jim ProcterJAL-3541 use javaExec to run clover tasks
 commit | commitdiff | tree
2020-02-21 Jim ProcterMerge branch 'bug/JAL-3536getCrossrefTwice' into develop
 commit | commitdiff | tree
2020-02-21 Jim ProcterJAL-3186 ensure transparency slider position is updated...
commit | commitdiff | tree
2020-02-21 Jim ProcterJAL-3186 avoid repainting twice in splitframe
 commit | commitdiff | tree
2020-02-21 Jim ProcterMerge branch 'features/JAL-3187_uitweaks' into develop
 commit | commitdiff | tree
2020-02-21 Jim ProcterMerge branch 'develop' into features/JAL-3187_uitweaks
 commit | commitdiff | tree
2020-02-20 Jim ProcterJAL-3187 nice to have enabling/disabling of apply/cancel...
commit | commitdiff | tree
2020-02-20 Jim ProcterJAL-3187 i18n
 commit | commitdiff | tree
2020-02-20 Jim ProcterJAL-3187 use the recommended way of catching tab selection...
commit | commitdiff | tree
2020-02-20 Jim ProcterJAL-3187 individual feature settings panel has revert...
commit | commitdiff | tree
2020-02-19 Jim ProcterJAL-3187 i18n for titles in windows/tabs
 commit | commitdiff | tree
2020-02-19 Jim ProcterJAL-3535 todo re titles for CDS and Protein views in...
commit | commitdiff | tree
2020-02-19 Jim ProcterJAL-3187 - tabbed pane is nulled when feature settings...
commit | commitdiff | tree
2020-02-19 Jim ProcterJAL-3187 JAL-2764 close feature settings when parent...
commit | commitdiff | tree
2020-02-19 Jim ProcterMerge branch 'patch/JAL-3538_fontantialiasingbydefault...
commit | commitdiff | tree
2020-02-19 Jim ProcterJAL-3538 JAL-3407 release notes
 commit | commitdiff | tree
2020-02-19 Jim ProcterJAL-3407 release next week :D
 commit | commitdiff | tree
2020-02-19 Jim ProcterJAL-3538 anti-aliasing enabled by default
 commit | commitdiff | tree
2020-02-18 Jim ProcterJAL-3529 attempt to guess database for a sequence’s...
commit | commitdiff | tree
2020-02-18 Jim ProcterJAL-3529 test for AC <Uniprot/EMBL> rather than DR...
commit | commitdiff | tree
2020-02-18 Jim ProcterJAL-3529 assert Uniprot refs must be provided as primary...
commit | commitdiff | tree
2020-02-18 Jim ProcterJAl-3187 JAL-3535 JAL-3534 update open feature settings...
commit | commitdiff | tree
2020-02-17 Jim ProcterJAL-3536 failing test and test data
 commit | commitdiff | tree
2020-02-17 Jim ProcterJAL-3534 patch for simple case (Protein or Nucleotide...
commit | commitdiff | tree
2020-02-17 Jim ProcterJAL-3187 fix for JAL-3533 on CDS/Protein tabbed feature...
commit | commitdiff | tree
2020-02-17 Jim ProcterJAL-3187 JAL-3533 JAL-3535 set feature settings dialog...
commit | commitdiff | tree
2020-02-17 Jim ProcterJAL-3187 better semantics for feature settings closed...
commit | commitdiff | tree
2020-02-14 Jim ProcterJAL-3532 TODO comment
 commit | commitdiff | tree
2020-02-14 Jim Procterfix for JAL-3529
 commit | commitdiff | tree
2020-02-14 Jim ProcterJAL-3531 failing test
 commit | commitdiff | tree
2020-02-14 Jim ProcterJAL-3529 more detailed asserts to detect whitespace...
commit | commitdiff | tree
2020-02-14 Jim ProcterJAL-3529 preferentially output source dbrefs or principle...
commit | commitdiff | tree
2020-02-14 Jim ProcterJAL-3529 failing test for bug
 commit | commitdiff | tree
2020-02-14 Jim ProcterJAL-3187 alternative solution - gather feature settings...
commit | commitdiff | tree
2020-02-14 Jim ProcterJAL-1354 JAL-3528 fix bug from b594d516dac69eebcccdc74393388...
commit | commitdiff | tree
next