| 2017-06-30 |
gmungoc | JAL-2526 correct treatment of contact features only...
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commit | commitdiff | tree |
| 2017-06-30 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList
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commit | commitdiff | tree |
| 2017-06-28 |
gmungoc | Merge branch 'bug/JAL-2600resizeflicker' into develop
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commit | commitdiff | tree |
| 2017-06-27 |
gmungoc | JAL-1858 repaint after Amend Features dialog
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commit | commitdiff | tree |
| 2017-06-27 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList
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commit | commitdiff | tree |
| 2017-06-27 |
gmungoc | JAL-2602 check for null or empty description when copying...
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commit | commitdiff | tree |
| 2017-06-27 |
gmungoc | JAL-1858 highlights on wrapped panel - work in progress
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commit | commitdiff | tree |
| 2017-06-27 |
gmungoc | JAL-147 scroll wrapped panel by one width's worth at...
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commit | commitdiff | tree |
| 2017-06-26 |
gmungoc | JAL-1858 ensure full redraw on 'remove all selections'
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commit | commitdiff | tree |
| 2017-06-24 |
gmungoc | JAL-2589 unit test updated
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commit | commitdiff | tree |
| 2017-06-24 |
gmungoc | JAL-2547 fix case of gap followed by enclosing contact...
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commit | commitdiff | tree |
| 2017-06-24 |
gmungoc | JAL-1858 null img when doing full repaint of wrapped...
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commit | commitdiff | tree |
| 2017-06-24 |
gmungoc | JAL-1858 don't fastpaint highlights if wrapped format
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commit | commitdiff | tree |
| 2017-06-24 |
gmungoc | JAL-1858 refactored method to redraw previous/new highlighte...
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commit | commitdiff | tree |
| 2017-06-23 |
gmungoc | JAL-1858 handle hidden columns when computing region...
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commit | commitdiff | tree |
| 2017-06-23 |
gmungoc | JAL-1858 'fastPaint' of minimal region for highlights...
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commit | commitdiff | tree |
| 2017-06-22 |
gmungoc | JAL-2481 JAL-2593 JAL-2526 further optimisation of...
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commit | commitdiff | tree |
| 2017-06-22 |
gmungoc | JAL-2480 simpler and safer test to avoid adding duplicates
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commit | commitdiff | tree |
| 2017-06-21 |
gmungoc | JAL-2480 tidy generic initialisations, SequenceFeatures...
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commit | commitdiff | tree |
| 2017-06-21 |
gmungoc | JAL-2524 don't render up to a hidden marker beyond...
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commit | commitdiff | tree |
| 2017-06-20 |
gmungoc | JAL-2526 don't retain lastColumnPosition from an invalidated...
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commit | commitdiff | tree |
| 2017-06-15 |
gmungoc | JAL-2563 test updated for fix
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commit | commitdiff | tree |
| 2017-06-15 |
gmungoc | Merge branch 'bug/JAL-2386groupConservationColouring...
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commit | commitdiff | tree |
| 2017-06-15 |
gmungoc | JAL-2418 typos
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commit | commitdiff | tree |
| 2017-06-15 |
gmungoc | Merge branch 'bug/JAL-2589gapColour' into develop
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commit | commitdiff | tree |
| 2017-06-14 |
gmungoc | JAL-2598 Sequence.getSequence return a copy of the...
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commit | commitdiff | tree |
| 2017-06-13 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList
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commit | commitdiff | tree |
| 2017-06-12 |
gmungoc | JAL-2577 mirror select/hide by annotation in split...
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commit | commitdiff | tree |
| 2017-06-12 |
gmungoc | JAL-2577 mirror hide/select columns by annotation across...
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commit | commitdiff | tree |
| 2017-06-09 |
gmungoc | JAL-2589 render colour scheme gap colour in overview
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commit | commitdiff | tree |
| 2017-06-09 |
gmungoc | JAL-2594 avoid stack trace creating feature on gapped...
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commit | commitdiff | tree |
| 2017-06-09 |
gmungoc | JAL-2480 tidy javadoc
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commit | commitdiff | tree |
| 2017-06-09 |
gmungoc | JAL-2593 avoid redundant rendering of co-located features
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commit | commitdiff | tree |
| 2017-06-08 |
gmungoc | JAL-2526 correct boundary conditions for sequence left...
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commit | commitdiff | tree |
| 2017-06-08 |
gmungoc | JAL-2386 JAL-2570 use ResidueShader copy constructor...
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commit | commitdiff | tree |
| 2017-06-08 |
gmungoc | JAL-2526 cache first/last residue column positions...
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commit | commitdiff | tree |
| 2017-06-08 |
gmungoc | JAL-2526 setStatusMessage avoid redundant findPosition...
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commit | commitdiff | tree |
| 2017-06-08 |
gmungoc | JAL-2526 reuse findIndex result if start==end
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commit | commitdiff | tree |
| 2017-06-07 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList
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commit | commitdiff | tree |
| 2017-06-07 |
gmungoc | JAL-2386 ensure group conservation shading is applied...
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commit | commitdiff | tree |
| 2017-06-06 |
gmungoc | JAL-2589 correct colour for Gap in Score and User Defined...
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commit | commitdiff | tree |
| 2017-06-06 |
gmungoc | JAL-2526 less stringent test for invalid cursor
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commit | commitdiff | tree |
| 2017-06-05 |
gmungoc | JAL-2505 comments updated
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commit | commitdiff | tree |
| 2017-06-05 |
gmungoc | JAL-2480 remove redundant method, further test coverage
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commit | commitdiff | tree |
| 2017-06-05 |
gmungoc | JAL-2505 explicit (and final) contactFeature property
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commit | commitdiff | tree |
| 2017-06-05 |
gmungoc | Merge branch 'features/JAL-2526sequenceCursor' into
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commit | commitdiff | tree |
| 2017-06-05 |
gmungoc | Merge branch 'features/JAL-2446NCList' into
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commit | commitdiff | tree |
| 2017-06-05 |
gmungoc | Merge branch 'features/JAL-2446NCList' into
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commit | commitdiff | tree |
| 2017-06-05 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList
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commit | commitdiff | tree |
| 2017-06-02 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features...
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commit | commitdiff | tree |
| 2017-06-02 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features...
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commit | commitdiff | tree |
| 2017-06-02 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList
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commit | commitdiff | tree |
| 2017-06-02 |
gmungoc | JAL-2526 additional tests for findPosition with/without...
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commit | commitdiff | tree |
| 2017-06-02 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features...
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commit | commitdiff | tree |
| 2017-06-01 |
gmungoc | JAL-2526 additional calls to sequenceChanged() after...
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commit | commitdiff | tree |
| 2017-06-01 |
gmungoc | JAL-2526 zapCursor() renamed sequenceChanged()
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commit | commitdiff | tree |
| 2017-06-01 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features...
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commit | commitdiff | tree |
| 2017-06-01 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList
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commit | commitdiff | tree |
| 2017-06-01 |
gmungoc | JAL-2754 Sequence.findFeatures(fromCol, toCol)
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commit | commitdiff | tree |
| 2017-06-01 |
gmungoc | JAL-2563 JAL-2547 amended unit tests for amended setStatusMe...
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commit | commitdiff | tree |
| 2017-05-31 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features...
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commit | commitdiff | tree |
| 2017-05-31 |
gmungoc | JAL-2483 JAL-2575 don't sort newly discovered features
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commit | commitdiff | tree |
| 2017-05-31 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features...
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commit | commitdiff | tree |
| 2017-05-31 |
gmungoc | JAL-2574 preparation for Sequence.findFeatures(col1...
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commit | commitdiff | tree |
| 2017-05-31 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList
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commit | commitdiff | tree |
| 2017-05-31 |
gmungoc | JAL-2547 handle contact features 'around' a gap correctly
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commit | commitdiff | tree |
| 2017-05-30 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features...
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commit | commitdiff | tree |
| 2017-05-30 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList
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commit | commitdiff | tree |
| 2017-05-30 |
gmungoc | JAL-2547 tooltip/AmendFeatures on gap straddled by...
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commit | commitdiff | tree |
| 2017-05-30 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features...
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commit | commitdiff | tree |
| 2017-05-30 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList
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commit | commitdiff | tree |
| 2017-05-30 |
gmungoc | JAL-2570 don't zap group colour scheme when mapping...
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commit | commitdiff | tree |
| 2017-05-30 |
gmungoc | JAL-2526 first draft of findIndex/findPosition with...
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commit | commitdiff | tree |
| 2017-05-29 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList
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commit | commitdiff | tree |
| 2017-05-29 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList
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commit | commitdiff | tree |
| 2017-05-29 |
gmungoc | JAL-2526 Sequence.findPositions to get residue positions...
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commit | commitdiff | tree |
| 2017-05-26 |
gmungoc | JAL-2290 no update if no change of residue JAL-2547...
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commit | commitdiff | tree |
| 2017-05-26 |
gmungoc | JAL-2480 move ContiguousI and Range to jalview.datamodel
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commit | commitdiff | tree |
| 2017-05-25 |
gmungoc | JAL-2557 removal of Sequence.sequenceFeatures
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commit | commitdiff | tree |
| 2017-05-25 |
gmungoc | JAL-2050 make SequenceFeature.score final, adjust constructo...
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commit | commitdiff | tree |
| 2017-05-25 |
gmungoc | JAL-2505 simplifying number of SequenceFeature constructors...
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commit | commitdiff | tree |
| 2017-05-25 |
gmungoc | JAL-2505 removed SequenceFeature constructor JAL-1641...
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commit | commitdiff | tree |
| 2017-05-25 |
gmungoc | JAL-2490 test coverage of empty and null feature group...
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commit | commitdiff | tree |
| 2017-05-24 |
gmungoc | JAL-2505 make SequenceFeature type, begin, end, featureGroup...
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commit | commitdiff | tree |
| 2017-05-24 |
gmungoc | JAL-2506 relocate Uniprot binding classes, bind to...
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commit | commitdiff | tree |
| 2017-05-24 |
gmungoc | JAL-2505 remove setters for SequenceFeature.begin,end...
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commit | commitdiff | tree |
| 2017-05-24 |
gmungoc | JAL-2529 add object_type=cdna to EnsemblCdna parameters
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commit | commitdiff | tree |
| 2017-05-24 |
gmungoc | Merge branch 'bug/JAL-2541cutWithFeatures' into features...
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commit | commitdiff | tree |
| 2017-05-24 |
gmungoc | JAL-2505 JAL-2542 SequenceFeatures.shift() to shift...
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commit | commitdiff | tree |
| 2017-05-24 |
gmungoc | JAL-2542 correct adjustment of sequence features for...
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commit | commitdiff | tree |
| 2017-05-24 |
gmungoc | JAL-2505 delete and readd modified feature after Cut...
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commit | commitdiff | tree |
| 2017-05-23 |
gmungoc | JAL-2490 find features for export as GFF, JAL-2548...
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commit | commitdiff | tree |
| 2017-05-23 |
gmungoc | JAL-2490 test coverage for printGffFormat before refactoring
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commit | commitdiff | tree |
| 2017-05-23 |
gmungoc | JAL-2490 unit tests for getFeaturesForGroup
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commit | commitdiff | tree |
| 2017-05-23 |
gmungoc | JAL-2547 don't show features in tooltip over a gap
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commit | commitdiff | tree |
| 2017-05-23 |
gmungoc | JAL-2490 tidy code and tests for feature export in...
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commit | commitdiff | tree |
| 2017-05-23 |
gmungoc | JAL-2490 improved lookup of features for Export Features...
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commit | commitdiff | tree |
| 2017-05-23 |
gmungoc | JAL-2480 methods to get features for group
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commit | commitdiff | tree |
| 2017-05-22 |
gmungoc | JAL-2505 use setter not direct access to sf.description
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commit | commitdiff | tree |
| 2017-05-22 |
gmungoc | JAL-2505 updates after conflicting merge of JAL-2504
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commit | commitdiff | tree |
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