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2019-11-21	gmungoc	JAL-3485 constants for CDNA_CONSENSUS, STRUCTURE_CONSENSUS...	commit \| commitdiff \| tree
2019-11-21	gmungoc	JAL-3484 temporary override of autocalc preferences...	commit \| commitdiff \| tree
2019-11-21	gmungoc	JAL-3485 (enum) constants for Auto-annotation label...	commit \| commitdiff \| tree
2019-11-21	gmungoc	JAL-3081 test and fix for preserve annotation order...	commit \| commitdiff \| tree
2019-11-19	gmungoc	JAL-3484 tests for load project with changed autocalc...	commit \| commitdiff \| tree
2019-11-17	gmungoc	JAL-3081 sort annotations by order read from project...	commit \| commitdiff \| tree
2019-11-15	gmungoc	JAL-3081 refactored AnnotationSorter constructor and...	commit \| commitdiff \| tree
2019-11-15	gmungoc	JAL-3199 corrected sort menu items to JMenuItem	commit \| commitdiff \| tree
2019-11-15	gmungoc	JAL-3081 is/setShowAutocalculatedAbove pulled up to...	commit \| commitdiff \| tree
2019-11-14	gmungoc	JAL-3081 compiler warnings and formatting improvements	commit \| commitdiff \| tree
2019-11-14	gmungoc	JAL-3081 unit tests for 'custom' (no) sort, sort autocalc...	commit \| commitdiff \| tree
2019-11-14	gmungoc	JAL-3081 autocalculated annotation first/last leaves...	commit \| commitdiff \| tree
2019-11-14	gmungoc	JAL-3199 sort annotations after adding from annotation...	commit \| commitdiff \| tree
2019-11-14	gmungoc	JAL-3199 'Sort Annotations by...' now a one-off action...	commit \| commitdiff \| tree
2019-11-14	gmungoc	JAL-3199 sort annotations after adding from web service	commit \| commitdiff \| tree
2019-11-14	gmungoc	JAL-3199 promote sortAnnotations to AlignmentViewPanel	commit \| commitdiff \| tree
2019-11-08	gmungoc	JAL-3081 restore annotation ordering from project ...	commit \| commitdiff \| tree
2019-11-08	gmungoc	JAL-3081 more efficient algorithm for annotation ordering...	commit \| commitdiff \| tree
2019-11-08	gmungoc	JAL-3081 new method to get alignment sequence order...	commit \| commitdiff \| tree
2019-11-08	gmungoc	JAL-3081 promote setSortAnnotationsBy() to api method	commit \| commitdiff \| tree
2019-11-08	gmungoc	JAL-3081 schema and binding class changes to save annotation...	commit \| commitdiff \| tree
2019-04-03	gmungoc	JAL-3199 apply annotation sorting on AlignFrame construction	commit \| commitdiff \| tree
2019-04-03	gmungoc	JAL-3081 JAL-3199 no auto-sort of annotations after...	commit \| commitdiff \| tree
2019-03-29	gmungoc	JAL-3140 InstallAnywhere updated to intervalstore-v1...	commit \| commitdiff \| tree
2019-03-29	gmungoc	Merge branch 'develop' of https://source.jalview.org...	commit \| commitdiff \| tree
2019-03-29	gmungoc	JAL-3140 intervalstore now v1.0 (public release)	commit \| commitdiff \| tree
2019-03-28	gmungoc	Merge branch 'develop' of https://source.jalview.org...	commit \| commitdiff \| tree
2019-03-28	gmungoc	Merge branch 'develop' of https://source.jalview.org...	commit \| commitdiff \| tree
2019-03-28	gmungoc	JAL-1889 patch for failing isControDown test on build...	commit \| commitdiff \| tree
2019-03-28	gmungoc	Merge branch 'feature/JAL-3181linkOrdering' into develop	commit \| commitdiff \| tree
2019-03-27	gmungoc	JAL-2620 improved error reporting on failure to load...	commit \| commitdiff \| tree
2019-03-25	gmungoc	JAL-2717 adjusted code so default correctly returned...	commit \| commitdiff \| tree
2019-03-25	gmungoc	JAL-3127 scripts updated for method signature change	commit \| commitdiff \| tree
2019-03-23	gmungoc	JAL-1889 explicit recalc of geometry for scale left...	commit \| commitdiff \| tree
2019-03-23	gmungoc	JAL-1889 remove debug logging, add updateLayout()	commit \| commitdiff \| tree
2019-03-22	gmungoc	JAL-1889 more debug logging	commit \| commitdiff \| tree
2019-03-21	gmungoc	JAL-1889 better debug logging	commit \| commitdiff \| tree
2019-03-21	gmungoc	JAL-1889 temporary debug in findColumn()	commit \| commitdiff \| tree
2019-03-21	gmungoc	JAL-1889 added belt and braces deleteOnExit() to test...	commit \| commitdiff \| tree
2019-03-21	gmungoc	JAL-1889 correct props param, remove dasserver, output...	commit \| commitdiff \| tree
2019-03-21	gmungoc	JAL-1889 more diagnostics for CommandLineOperations	commit \| commitdiff \| tree
2019-03-21	gmungoc	JAL-1889 diagnostics for failing test on server	commit \| commitdiff \| tree
2019-03-20	gmungoc	JAL-3093 fine tuning of SeqPanel tooltip	commit \| commitdiff \| tree
2019-03-20	gmungoc	JAL-3212 unit test and fix for Scale Panel bug	commit \| commitdiff \| tree
2019-03-15	gmungoc	JAL-2964 missed branch for restore link tree to all...	commit \| commitdiff \| tree
2019-03-15	gmungoc	JAL-3203 Overview show hidden default false also in...	commit \| commitdiff \| tree
2019-03-12	gmungoc	JAL-1270 missing 'alwaysRun=true' added to setup/teardown	commit \| commitdiff \| tree
2019-03-12	gmungoc	Merge branch 'feature/JAL-3127_seqidChainshading' into...	commit \| commitdiff \| tree
2019-03-12	gmungoc	JAL-3127 check for null viewport	commit \| commitdiff \| tree
2019-03-11	gmungoc	Merge branch 'develop' into merge/JAL-3127	commit \| commitdiff \| tree
2019-03-11	gmungoc	JAL-1270 JAL-2416 JAL-2839 set alwaysRun=true in test...	commit \| commitdiff \| tree
2019-03-11	gmungoc	JAL-3127 fix faulty merge	commit \| commitdiff \| tree
2019-03-11	gmungoc	Merge branch 'develop' into merge/JAL-3127	commit \| commitdiff \| tree
2019-03-11	gmungoc	Merge branch 'feature/JAL-2250colourAllGroups' into...	commit \| commitdiff \| tree
2019-03-11	gmungoc	JAL-3201 restore group colours correctly from project	commit \| commitdiff \| tree
2019-03-11	gmungoc	Merge branch 'feature/JAL-3127_seqidChainshading' into...	commit \| commitdiff \| tree
2019-03-11	gmungoc	JAL-3206 strict above/below threshold test restored	commit \| commitdiff \| tree
2019-03-11	gmungoc	Merge branch 'bug/JAL-3075' into develop	commit \| commitdiff \| tree
2019-03-08	gmungoc	JAL-3193 defensive trim of URL read from properties...	commit \| commitdiff \| tree
2019-03-08	gmungoc	JAL-2903 typos fixed	commit \| commitdiff \| tree
2019-03-08	gmungoc	JAL-3075 update column selection on mouse up after...	commit \| commitdiff \| tree
2019-03-07	gmungoc	Merge branch 'feature/JAL-3180colourAnnotationMenu...	commit \| commitdiff \| tree
2019-03-07	gmungoc	JAL-2250 default Apply Colour to All Groups selected	commit \| commitdiff \| tree
2019-03-07	gmungoc	JAL-2717 JAL-2360 belated unit tests for ColourMenuHelper	commit \| commitdiff \| tree
2019-03-07	gmungoc	JAL-2717 corrected i18n of colour scheme names	commit \| commitdiff \| tree
2019-03-07	gmungoc	Merge branch 'feature/JAL-3205symmetricCalc' into develop	commit \| commitdiff \| tree
2019-03-07	gmungoc	JAL-3035 removed spring libraries as only used for...	commit \| commitdiff \| tree
2019-03-06	gmungoc	Merge branch 'tasks/JAL-3035_remove_dasobert_dependency...	commit \| commitdiff \| tree
2019-03-06	gmungoc	JAL-3035 restored erroneous deletion	commit \| commitdiff \| tree
2019-03-06	gmungoc	Merge branch 'tasks/JAL-3035_remove_dasobert_dependency...	commit \| commitdiff \| tree
2019-03-06	gmungoc	JAL-3035 more das bits removed	commit \| commitdiff \| tree
2019-03-05	gmungoc	Merge branch 'bug/JAL-3201groupClustal' into develop	commit \| commitdiff \| tree
2019-03-05	gmungoc	Merge remote-tracking branch 'origin/features/JAL-2620altern...	commit \| commitdiff \| tree
2019-03-05	gmungoc	Merge branch 'bug/JAL-2621' into develop	commit \| commitdiff \| tree
2019-03-05	gmungoc	Merge remote-tracking branch 'origin/bug/JAL-3141_Messages_d...	commit \| commitdiff \| tree
2019-03-05	gmungoc	Merge remote-tracking branch 'origin/bug/JAL-2839findWithHid...	commit \| commitdiff \| tree
2019-03-05	gmungoc	Merge remote-tracking branch 'origin/bug/JAL-914multipleHelp...	commit \| commitdiff \| tree
2019-03-05	gmungoc	Merge remote-tracking branch 'origin/features/JAL-2814ftsHel...	commit \| commitdiff \| tree
2019-03-05	gmungoc	Merge remote-tracking branch 'origin/bug/JAL-3002fastPaintWr...	commit \| commitdiff \| tree
2019-03-05	gmungoc	JAL-3049 JAL-3032 tidy/i18n code, remove redundant...	commit \| commitdiff \| tree
2019-03-05	gmungoc	JAL-3049 redo (part of) commit 92bc328	commit \| commitdiff \| tree
2019-03-05	gmungoc	JAL-3054 small y-overlap of tooltip and cell leads...	commit \| commitdiff \| tree
2019-03-05	gmungoc	Merge remote-tracking branch 'origin/bug/JAL-3049colourCellT...	commit \| commitdiff \| tree
2019-03-05	gmungoc	JAL-3205 added a delta parameter to Matrix.equals()	commit \| commitdiff \| tree
2019-03-04	gmungoc	Merge branch 'bug/JAL-3072scrollThread' into merge...	commit \| commitdiff \| tree
2019-03-04	gmungoc	Merge remote-tracking branch 'origin/bug/JAL-3082selectRegex...	commit \| commitdiff \| tree
2019-03-04	gmungoc	JAL-3206 avoid divide by zero when threshold is graphMin...	commit \| commitdiff \| tree
2019-03-04	gmungoc	Merge branch 'bug/JAL-3099alignmentVisibleWidth' into...	commit \| commitdiff \| tree
2019-03-04	gmungoc	Merge remote-tracking branch 'origin/tasks/JAL-3035_remove_d...	commit \| commitdiff \| tree
2019-03-04	gmungoc	Merge branch 'bug/JAL-3120restoreFeatureColour' into...	commit \| commitdiff \| tree
2019-03-04	gmungoc	JAL-3205 worked examples in unit test for symmetric...	commit \| commitdiff \| tree
2019-03-03	gmungoc	JAL-3205 one more unit test case	commit \| commitdiff \| tree
2019-03-03	gmungoc	JAL-3205 faster calculation with symmetric score matrix	commit \| commitdiff \| tree
2019-03-01	gmungoc	Merge branch 'bug/JAL-2791exportFilteredFeature' into...	commit \| commitdiff \| tree
2019-03-01	gmungoc	Merge branch 'feature/JAL-3093wrappedModeTooltips'...	commit \| commitdiff \| tree
2019-03-01	gmungoc	JAL-3093 unit test adapts to actual number of annotation...	commit \| commitdiff \| tree
2019-03-01	gmungoc	Merge branch 'feature/JAL-3093wrappedModeTooltips'...	commit \| commitdiff \| tree
2019-03-01	gmungoc	Merge branch 'feature/JAL-1244stretchStatusMsg' into...	commit \| commitdiff \| tree
2019-03-01	gmungoc	Merge branch 'bug/JAL-3139colocatedFeatures' into develop	commit \| commitdiff \| tree
2019-03-01	gmungoc	JAL-3154 disable reorder columns before adding to viewport	commit \| commitdiff \| tree
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