| 2011-08-30 |
jprocter | JAL-715 - notify user of parsing problems for results...
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commit | commitdiff | tree |
| 2011-08-30 |
jprocter | retrieve URL for datasource of packed set
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commit | commitdiff | tree |
| 2011-08-30 |
jprocter | ensure parsing errors and 'lack of data' errors are...
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commit | commitdiff | tree |
| 2011-08-30 |
jprocter | JAL-715 need to URLencode constant values when serializing...
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commit | commitdiff | tree |
| 2011-08-29 |
jprocter | JAL-715 - grammar for warning message.
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commit | commitdiff | tree |
| 2011-08-29 |
jprocter | added notes on third party library licencing and updated...
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commit | commitdiff | tree |
| 2011-08-29 |
jprocter | JAL-919, JAL-715 - prototype service editing dialog...
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commit | commitdiff | tree |
| 2011-08-29 |
jprocter | JAL-633, JAL-591 - refactored ArgumentI.getValue from...
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commit | commitdiff | tree |
| 2011-08-29 |
jprocter | refactored popup dialog boilerplate code to own class
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commit | commitdiff | tree |
| 2011-08-29 |
jprocter | JAL-633 simple concrete parameter and option objects...
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commit | commitdiff | tree |
| 2011-08-29 |
jprocter | JAL-633, JAL-591 - refactored ArgumentI.getValue from...
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commit | commitdiff | tree |
| 2011-08-25 |
jprocter | constructor only needs GUI container interface
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commit | commitdiff | tree |
| 2011-08-25 |
jprocter | JAL-591 - refactored web service parameter dialog to...
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commit | commitdiff | tree |
| 2011-08-25 |
jprocter | JAL-715 - better validation logic
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commit | commitdiff | tree |
| 2011-08-25 |
jprocter | debug dialog
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commit | commitdiff | tree |
| 2011-08-25 |
jprocter | JAL-715 - prevent empty elements being generated
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commit | commitdiff | tree |
| 2011-08-24 |
jprocter | JAL-715 dialog for interactively editing a new or existing...
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commit | commitdiff | tree |
| 2011-08-24 |
jprocter | new Swing and SWT capable form layout manager - miglayout
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commit | commitdiff | tree |
| 2011-08-24 |
jprocter | JAL-715 bugfixes and refactor of parsing code for use...
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commit | commitdiff | tree |
| 2011-08-24 |
jprocter | refactor labelled button creator to JvSwingUtils
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commit | commitdiff | tree |
| 2011-08-23 |
jprocter | JAL-715 - simple tests and functions for IO of service...
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commit | commitdiff | tree |
| 2011-08-23 |
jprocter | JAL-715 - allow rest service attributes to be exported...
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commit | commitdiff | tree |
| 2011-08-19 |
jprocter | JAL-908 JAL-912 JAL-516 documented annotation HTML...
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commit | commitdiff | tree |
| 2011-08-19 |
jprocter | JAL-908,JAL-701 - patch applet to strip HTML tags from...
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commit | commitdiff | tree |
| 2011-08-19 |
jprocter | JAL-908 JAL-701 refactored HTML escape/unescape code...
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commit | commitdiff | tree |
| 2011-08-18 |
jprocter | testdata for JAL-701 and JAL-908
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commit | commitdiff | tree |
| 2011-08-18 |
jprocter | remove debug message
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commit | commitdiff | tree |
| 2011-08-18 |
jprocter | fix for JAL-701 - ensure '<' appears in tooltip in...
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commit | commitdiff | tree |
| 2011-08-18 |
jprocter | minor efficiency refactor
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commit | commitdiff | tree |
| 2011-08-18 |
jprocter | JAL-907 testdata for JAL-701
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commit | commitdiff | tree |
| 2011-08-18 |
jprocter | JAL-907 - test data directory readme
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commit | commitdiff | tree |
| 2011-08-17 |
jprocter | JAL-853 use service action attribute to index services...
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commit | commitdiff | tree |
| 2011-08-17 |
jprocter | remove any trailing '/' from the URL before validation...
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commit | commitdiff | tree |
| 2011-08-17 |
jprocter | avoid NPE race condition when several threads waiting...
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commit | commitdiff | tree |
| 2011-08-17 |
jprocter | fix for JAL-888
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commit | commitdiff | tree |
| 2011-08-17 |
jprocter | fix for JAL-888
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commit | commitdiff | tree |
| 2011-08-17 |
jprocter | JAL-898 - ensure we only remove a clargs progress bar...
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commit | commitdiff | tree |
| 2011-08-17 |
jprocter | JAL-813 fix - check whether conservation is applied...
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commit | commitdiff | tree |
| 2011-08-17 |
jprocter | JAL-867 - rejigged layout to a single splitpane wide...
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commit | commitdiff | tree |
| 2011-08-15 |
jprocter | JAL-750 automaticScrolling is true by default
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commit | commitdiff | tree |
| 2011-08-15 |
jprocter | JAL-750 - automaticScrolling=true by default. Refactored...
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commit | commitdiff | tree |
| 2011-08-15 |
jprocter | JAL-747 - warning dialog if Jalview can't resolve filename...
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commit | commitdiff | tree |
| 2011-08-15 |
jprocter | JAL-904 added scrollToRow and scrollToColumn methods...
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commit | commitdiff | tree |
| 2011-08-05 |
jprocter | example script that will submit a muscle jabaws job...
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commit | commitdiff | tree |
| 2011-08-05 |
jprocter | fetch groovy script from URL (JAL-899) and show progress...
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commit | commitdiff | tree |
| 2011-08-05 |
jprocter | allow several progress bars on the desktop window ...
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commit | commitdiff | tree |
| 2011-08-03 |
jprocter | Merge branch 'master' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2011-08-03 |
jprocter | refactored resolvetocodebase code and reused for resource...
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commit | commitdiff | tree |
| 2011-08-03 |
jprocter | refactored resolvetocodebase code and reused for resource...
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commit | commitdiff | tree |
| 2011-08-03 |
jprocter | fix NPE when applets stop. seems to make the simple...
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commit | commitdiff | tree |
| 2011-08-03 |
jprocter | refactor schema to group swing window geometry attributes
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commit | commitdiff | tree |
| 2011-07-28 |
jprocter | refer to local default setting for proxy when connecting to
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commit | commitdiff | tree |
| 2011-07-28 |
jprocter | added 'since 2.x notes to parameters'. User configurable...
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commit | commitdiff | tree |
| 2011-07-26 |
jprocter | example alignment for JAL-862 - removed signal peptides
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commit | commitdiff | tree |
| 2011-07-25 |
jprocter | use proper encoding for storing colour as user preference...
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commit | commitdiff | tree |
| 2011-07-22 |
jprocter | todo for JAL-860 - associate multiple sequences with...
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commit | commitdiff | tree |
| 2011-07-22 |
jprocter | applet min/max annotation shading parameter documentation...
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commit | commitdiff | tree |
| 2011-07-22 |
jprocter | ensure propagation of colour change on annotation update...
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commit | commitdiff | tree |
| 2011-07-22 |
jprocter | fix NPE when annotation colourgradient is applied
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commit | commitdiff | tree |
| 2011-07-22 |
jprocter | code style
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commit | commitdiff | tree |
| 2011-07-22 |
jprocter | default parameter for colours in annotation shading...
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commit | commitdiff | tree |
| 2011-07-22 |
jprocter | method to get a user default colour (JAL-234)
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commit | commitdiff | tree |
| 2011-07-21 |
jprocter | retrieve all sequences matching a particular name ...
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commit | commitdiff | tree |
| 2011-07-21 |
jprocter | local instance of deployJava script from Sun/Oracle
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commit | commitdiff | tree |
| 2011-07-21 |
jprocter | refined applet example on examples page
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commit | commitdiff | tree |
| 2011-07-21 |
jprocter | better layout and structure display on startup
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commit | commitdiff | tree |
| 2011-07-21 |
jprocter | ensure contents of hash is extended JAL-876
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commit | commitdiff | tree |
| 2011-07-18 |
jprocter | fixed mouseover problem - still need to deal with flickering...
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commit | commitdiff | tree |
| 2011-07-10 |
jprocter | progress when saving state (JAL-870) and hack to trap...
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commit | commitdiff | tree |
| 2011-07-09 |
jprocter | documentation for menu item JAL-860
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commit | commitdiff | tree |
| 2011-07-09 |
jprocter | menu item and constructor to open a bunch of structures...
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commit | commitdiff | tree |
| 2011-07-09 |
jprocter | refactored from PopupMenu (for JAL-860)
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commit | commitdiff | tree |
| 2011-07-09 |
jprocter | todo re JAL-732
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commit | commitdiff | tree |
| 2011-07-09 |
jprocter | JAL-868 todo
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commit | commitdiff | tree |
| 2011-07-08 |
jprocter | open each query result from an alignment datasource...
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commit | commitdiff | tree |
| 2011-07-07 |
jprocter | comment re JAL-153
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commit | commitdiff | tree |
| 2011-07-07 |
jprocter | Set job title correctly and pass reason why
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commit | commitdiff | tree |
| 2011-07-07 |
jprocter | extract sequence from DNA bases like 'DG' (JAL-866)
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commit | commitdiff | tree |
| 2011-07-06 |
jprocter | ensure selseq is trimmed to just sequences included...
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commit | commitdiff | tree |
| 2011-07-05 |
jprocter | Revert "partial patch for JAL-411 - text rendered above...
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commit | commitdiff | tree |
| 2011-07-05 |
jprocter | partial patch for JAL-411 - text rendered above features
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commit | commitdiff | tree |
| 2011-07-05 |
jprocter | ensure javascript and jmol example directories are...
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commit | commitdiff | tree |
| 2011-07-05 |
jprocter | Merge branch 'master' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2011-07-05 |
jprocter | Revert "Revert "needed for linkedapplets_ng.html (JAL...
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commit | commitdiff | tree |
| 2011-07-05 |
jprocter | Revert "needed for linkedapplets_ng.html (JAL-859,JAL...
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commit | commitdiff | tree |
| 2011-07-05 |
jprocter | needed for linkedapplets_ng.html (JAL-859,JAL-469)
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commit | commitdiff | tree |
| 2011-07-05 |
jprocter | whole frame should be validated.
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commit | commitdiff | tree |
| 2011-07-05 |
jprocter | ignore any events after manager has already been finalized.
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commit | commitdiff | tree |
| 2011-07-05 |
jprocter | refactor to send list of model filenames involved in...
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commit | commitdiff | tree |
| 2011-07-05 |
jprocter | (JAL-856,JAL-621)
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commit | commitdiff | tree |
| 2011-07-05 |
jprocter | new and restructured javascript examples and documentation...
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commit | commitdiff | tree |
| 2011-07-04 |
jprocter | jmb isn't created yet, so use another SSM provider
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commit | commitdiff | tree |
| 2011-07-03 |
jprocter | TODO re JAL-433 - filter events if alignFrame is specified...
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commit | commitdiff | tree |
| 2011-07-03 |
jprocter | documentation (JAL-859, JAL-816, JAL-621)
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commit | commitdiff | tree |
| 2011-07-03 |
jprocter | extracted jalviewlite API calls as separate interface...
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commit | commitdiff | tree |
| 2011-07-03 |
jprocter | groovy scripting examples (JAL-???)
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commit | commitdiff | tree |
| 2011-07-03 |
jprocter | javadoc built under dist directory for all Jalview...
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commit | commitdiff | tree |
| 2011-06-30 |
jprocter | set initial annotation panel height appropriately ...
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commit | commitdiff | tree |
| 2011-06-29 |
jprocter | standard embedded jalviewLite example (JAL-815)
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commit | commitdiff | tree |
| 2011-06-29 |
jprocter | documentation and targets for building a working applet...
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commit | commitdiff | tree |
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