jalview.git
2018-09-09 Jim ProcterJAL-3106 normalise extension before checking if it...
2018-09-07 Jim ProcterJAL-3107 update any group associated annotation rows...
2018-09-07 Jim ProcterJAL-2988 JAL-2968 renamed patched VAqua5 to VAqua5...
2018-09-07 Jim ProcterJAL-2988 if selected file is null (On Java 10/OSX ...
2018-09-07 Jim ProcterJAL-2988 workaround: overload getSelectedFile() because...
2018-09-07 Jim ProcterJAL-3106 use .jvp as default
2018-09-07 Jim ProcterJAL-3105 fix for focus transfer after window closed...
2018-09-06 Jim ProcterJAL-3091 code committed in error (failed patch for...
2018-09-06 Jim ProcterJAL-3091 release notes for JAL-3104
2018-09-06 Jim ProcterJAL-3105 reallocate quality and consensus annotation...
2018-09-06 Jim ProcterJAL-2854 compute visible annotation panel height and...
2018-09-05 Jim ProcterJAL-3065 don’t quote class path args for Runtime.exec...
2018-09-05 Jim ProcterJAL-3091 update whats new!
2018-09-05 Jim ProcterJAL-3091 update Java 10 known issues/workarounds in...
2018-09-05 Jim ProcterJAL-3091 known defect in whats new for Java 10 issues...
2018-09-05 Jim ProcterJAL-3091 add Ben Soares to authors list and switch...
2018-09-05 Jim ProcterJAL-3091 release notes for updated memory settings
2018-09-05 Jim ProcterJAL-3091 release notes
2018-09-05 Jim ProcterJAL-3101 increase default heap size in IA and JNLP...
2018-09-05 Jim ProcterMerge branch 'patch/VAqua_saveload_update_JAL-2988...
2018-09-05 Jim ProcterJAL-2988 update InstallAnywhere install dependencies... patch/VAqua_saveload_update_JAL-2988
2018-09-05 Jim ProcterJAL-3091 release date set for Thursday 6th September
2018-09-05 Jim ProcterMerge branch 'bug/JAL-3065_DH_keyPair_Exception_nogroov...
2018-09-05 Jim ProcterJAL-3065 - amended commit 4906697ab6e5a79fbce3baae89f7... bug/JAL-3065_DH_keyPair_Exception_nogroovysettings
2018-09-04 Jim ProcterJAL-3091 JAL-2988 release notes re Java 10 and OSX
2018-09-03 Jim ProcterMerge branch 'patch/VAqua_saveload_update_JAL-2988...
2018-09-03 Jim ProcterMerge branch 'releases/Release_2_10_5_Branch' of source...
2018-09-03 Jim ProcterJAL-3091 -Dnosign to disable jar signing phase of build
2018-09-03 Jim ProcterJAL-3091 -Dnosign to disable jar signing phase of build
2018-09-03 Jim ProcterJAL-3091 release notes and whats new !
2018-09-03 gmungocMerge branch 'trialMerge' into releases/Release_2_10_5_...
2018-09-03 gmungocJAL-3076 fetch Ensembl sequence as JSON instead of...
2018-09-03 Jim ProcterJAL-3065 release notes
2018-09-03 Jim ProcterMerge branch 'bug/JAL-3065_DH_keyPair_Exception' into...
2018-09-03 Jim ProcterJAL-3087 release notes
2018-08-31 Jim ProcterJAL-3095 account for sequence start when highlighting...
2018-08-31 Jim ProcterJAL-3053 JAL-3061 JAL-3095 release notes
2018-08-31 Jim ProcterMerge branch 'bug/JAL-3061_RNA_secondary_structure_anno...
2018-08-31 Jim ProcterMerge branch 'releases/Release_2_10_5_Branch' of source...
2018-08-31 Jim ProcterJAL-3095 release notes
2018-08-31 Jim Procterjava doc and fix for JAL-3095 - region of trimmed RNA...
2018-08-31 gmungocJAL-3003 remove redundant call to drawSelectionGroup
2018-08-30 Jim ProcterJAL-3092 release notes
2018-08-30 Jim ProcterJAL-3092 make sure base pair counter is always moved...
2018-08-29 Jim ProcterJAL-3091 release notes for JAL-3003 JAL-3059
2018-08-28 Jim ProcterJAL-3003 different coloured borders in demo annotation...
2018-08-28 gmungocJAL-3059 use correct border colour for groups
2018-08-28 gmungocJAL-3003 draw selection group outline on main graphics...
2018-08-28 Jim ProcterJAL-247 release notes
2018-08-28 gmungocJAL-247 comment to clarify wrapped print algorithm
2018-08-28 gmungocJAL-247 print/export wrapped uses common code to draw...
2018-08-28 gmungocJAL-3087 include full alignment height in repeating...
2018-08-28 gmungocJAL-247 draw/print sequence ids now uses common code...
2018-08-28 Jim ProcterJAL-3091 release 2.10.5 added to release notes
2018-08-27 Ben SoaresJAL-3061 / JAL-3053
2018-08-22 Jim ProcterJAL-2988 workaround for jalview save as dialogs - clear...
2018-08-22 Jim ProcterJAL-2988 JAL-2976 update to latest VAqua release: VAqua5
2018-08-03 Ben SoaresJAL-3061
2018-08-03 Ben SoaresMerge branch 'bug/JAL-3061_RNA_secondary_structure_anno...
2018-08-02 Ben SoaresJAL-3053
2018-08-01 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into...
2018-08-01 Jim ProcterMerge branch 'task/JAL-3047_clover2104b1_cherrypick... releases/Release_2_10_4_Branch
2018-08-01 Jim ProcterJAL-3047 don't set classes unconditionally (forgot... task/JAL-3047_clover2104b1_cherrypick
2018-08-01 Jim ProcterJAL-3047 don’t let the makedist task complete if a...
2018-08-01 Jim ProcterJAL-3047 ‘cloverclasses’ build directory for instrument...
2018-08-01 Jim ProcterJAL-3047 enable clover for testng
2018-08-01 Jim ProcterJAL-3047 ignore clover output dir
2018-07-31 bsoaresStockholm file for test
2018-07-30 bsoaresFixed bug ignoring "alpha" extended braces in RNA SS...
2018-07-17 bsoaresJAL-3065
2018-06-07 Jim ProcterJAL-3009 release notes
2018-06-07 Jim ProcterMerge branch 'bugs/JAL-3009_blockingNetworkThreads...
2018-06-07 Jim ProcterJAL-2999 what's new and tweak release notes order
2018-06-07 gmungocJAL-2920 format/comment tidy
2018-06-07 gmungocJAL-2920 wrap description in <html/> if it includes...
2018-06-07 gmungocMerge branch 'releases/Release_2_10_4_Branch' of https...
2018-06-06 gmungocJAL-2920 unit tests for 3 or more original or variant...
2018-06-06 Jim ProcterJAL-2999 refine release notes
2018-06-06 Jim ProcterJAL-2999 release 2.10.4b1 on Thursday (promise!)
2018-06-06 Jim ProcterJAL-2920 release notes
2018-06-06 Jim ProcterMerge branch 'bug/JAL-2920_uniprotvariantfeature' into...
2018-06-06 Jim ProcterJAL-2920 revised TODO for JAL-3025 bug/JAL-2920_uniprotvariantfeature
2018-06-06 Jim ProcterJAL-2920 don’t output variant/original sequence as...
2018-06-06 Jim ProcterJAL-2920 JAL-3017 uniprot XML schema included in mappin...
2018-06-06 Jim ProcterJAL-1920 JAL-3017 use newline not <br/> in description...
2018-06-05 Jim ProcterJAL-3009 news reader thread should be in background... bugs/JAL-3009_blockingNetworkThreads
2018-06-05 Jim ProcterJAL-3009 Identifiers.Org retrieval on background thread.
2018-06-04 Jim ProcterJAL-3017 parse multiple variant elements for uniprot...
2018-06-04 Jim ProcterJAL-2999 update release notes and patch date to 5th...
2018-06-02 Jim ProcterJAL-3017 parse multiple variant elements for uniprot...
2018-05-30 Jim ProcterJAL-2999 2.10.4b1 release 31st May
2018-05-26 Jim ProcterJAL-2999 release date for 2.10.4b1 set for 27th May...
2018-05-25 Jim ProcterMerge branch 'documentation/JAL-2999_r2104b1' into...
2018-05-25 Jim ProcterMerge branch 'bug/JAL-2992panelHeight' into releases...
2018-05-25 Jim ProcterMerge branch 'bug/JAL-1460_dragndropWindows' into relea...
2018-05-25 gmungocJAL-2992 simpler heuristic for available height bug/JAL-2992panelHeight
2018-05-25 Jim ProcterMerge branch 'bug/JAL-2991_exporttosvgwrapview' into...
2018-05-25 Jim ProcterMerge branch 'feature/JAL-2994chimeraPath' into release...
2018-05-25 Jim ProcterJAL-1460 clarify release notes - and mention that short...
2018-05-25 Jim ProcterJAL-2994 add a few future release points for good measu... feature/JAL-2994chimeraPath
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