jalview.git
2019-06-12 Ben SoaresJAL-3299 Fixed gitHash and gitBranch definitions in...
2019-06-11 gmungocJAL-3143 also parse "phase" from JSON response if present
2019-06-11 gmungocJAL-3111 update release date placeholder
2019-06-11 gmungocJAL-3288 fixes for gain/lose focus
2019-06-10 Ben SoaresJAL-3248 quick fix for build.gradle when pandoc not...
2019-06-10 Ben SoaresJAL-3248 building.html now generated by pandoc 'brew...
2019-06-10 Ben SoaresJAL-3248 added conversion of building.md to building...
2019-06-10 Ben SoaresMerge branch 'develop' into task/JAL-3248_rewritten_bui...
2019-06-10 Ben SoaresMerge branch 'task/JAL-3248_rewritten_building_md_instr...
2019-06-10 Ben SoaresJAL-3248 Building from source documentation in markdown...
2019-06-10 Ben SoaresJAL-3248 Building from source documentation in markdown...
2019-06-07 Ben SoaresJAL-3248 Almost completed building doc
2019-06-07 gmungocMerge branch 'bug/JAL-3288splitFrameMenusJava11' into...
2019-06-07 Ben SoaresJAL-3248 a bit more
2019-06-07 gmungocJAL-3187 Viewport schema attributes for showComplementF...
2019-06-07 gmungocJAL-3251 added optional attributes Sequence.biotype...
2019-06-07 gmungocJAL-2738 use GeneLocus extends DBRefEntry to hold chrom...
2019-06-07 Ben SoaresMerge branch 'develop' into task/JAL-3248_rewritten_bui...
2019-06-07 Ben SoaresJAL-3225 removing slightly misleading rewrite of .class...
2019-06-06 Ben SoaresJAL-3225 Classpath now made in eclipse.classpath.file...
2019-06-05 gmungocJAL-3288 override JInternalFrame.setSelected() to avoid... bug/JAL-3288splitFrameMenusJava11
2019-06-04 Ben SoaresJAL-3287 correct local file URI for appbase and getdown...
2019-06-04 Ben SoaresJAL-3287 adjustment to HelpLinksChecker
2019-06-04 Ben SoaresJAL-3287 adjustment to HelpLinksChecker to run in Windo...
2019-06-04 Ben SoaresJAL-3248 small edits
2019-05-31 Ben SoaresJAL-3247 Adjusted Uninstall Old Jalview.app to just...
2019-05-31 Ben SoaresJAL-3248 extra tl;dr
2019-05-30 Ben SoaresJAL-3248 Essential tl;dr :)
2019-05-30 Ben SoaresMerge branch 'develop' into task/JAL-3248_rewritten_bui...
2019-05-29 gmungocJAL-2738 error logging if no ##reference found
2019-05-29 gmungocJAL-2738 accept .csi, default to GRCh37:homo_sapiens...
2019-05-28 Ben SoaresJAL-3277 Fixed getdown splashscreen. For unknown reason...
2019-05-28 Ben SoaresJAL-1988 Some TEST code accidentally left in now remove...
2019-05-28 Jalview Development... JAL-3247 sign the AppleScript uninstaller
2019-05-28 Ben SoaresJAL-3141 deleted TODO comment in Messages_es
2019-05-28 Ben SoaresMerge branch 'develop' into task/JAL-3141_JAL-3247_merge
2019-05-28 Ben SoaresJAL-3248 saving
2019-05-27 Ben SoaresJAL-3141 Added HashMap types for Java 1.8 compatibility
2019-05-27 Ben SoaresMerge branch 'task/JAL-3141_Customise_checkbox' into...
2019-05-27 Ben SoaresJAL-3141 Object array cast missing
2019-05-27 Ben SoaresMerge branch 'task/JAL-3247_JAL-3246_JAL-3254_JAL-3236_...
2019-05-27 Ben SoaresMerge branch 'develop' into task/JAL-3247_JAL-3246_JAL...
2019-05-27 Ben SoaresJAL-3247 Added AppleScript based App to run old Jalview...
2019-05-27 Ben SoaresJAL-3141 Generified the JvUtils.buildComboWithTooltips...
2019-05-27 gmungocJAL-3141 test file in test folder not examples
2019-05-25 Ben SoaresJAL-3141 One more error log fix
2019-05-25 Ben SoaresJAL-3141 Added tooltips on Schemes dropdown and Customi...
2019-05-24 Ben SoaresJAL-3141 Fixes recommended from gmc's test
2019-05-24 gmungocJAL-1988 Spanish typo corrección
2019-05-24 Ben SoaresJAL-3141 Fixed vertical size of the example filenames...
2019-05-24 Ben SoaresJAL-3141 Fixed tests
2019-05-24 Ben SoaresJAL-3141 Reworked a lot of BackupFiles to allow the...
2019-05-22 Ben SoaresMerge branch 'bug/JAL-3141_backupfiles_prefs_widget_dis...
2019-05-22 gmungocJAL-3111 help file spelling correction
2019-05-21 Ben SoaresJAL-3247 Launcher start improvements. RPM and DEB no...
2019-05-21 gmungocJAL-3273 small correction to expected result calculation
2019-05-20 Ben SoaresMerge branch 'task/JAL-3254_improved_max_memory_stack_s...
2019-05-20 Ben SoaresJAL-3247 Unix shell installer and tar archive corrected...
2019-05-20 Ben SoaresJAL-3254 Improved memory setting (allows mem for OS...
2019-05-13 Jim ProcterMerge branch 'task/JAL-3247_Install4j_improvements...
2019-05-13 Ben SoaresMerge branch 'task/JAL-3236_install4j_linux_unix_userla...
2019-05-13 Ben SoaresJAL-3247 nogradle option on this mac build/install...
2019-05-13 Ben SoaresJAL-3247 JAL-3254 JAL-3260 Fixed: JVL file jalview...
2019-05-10 Jim ProcterMerge branch 'task/JAL-3246_local_getdown_files' into...
2019-05-10 Ben SoaresJAL-3246 JAL-3247 Reworked JVL files as getdown.txt...
2019-05-10 Jim ProcterMerge branch 'task/JAL-3236_install4j_linux_unix_userla...
2019-05-09 Ben SoaresJAL-3236 Added unixInstaller to install4jMediaTypes...
2019-05-09 Jim ProcterMerge branch 'task/JAL-3246_local_getdown_files' into...
2019-05-09 Ben SoaresJAL-3247 JAL-3254 Ensure .jvp and .jvl appear first...
2019-05-09 Ben SoaresJAL-3247 JAL-3254 Fixed file association launch behavio...
2019-05-08 Ben SoaresJAL-3246 add -Pgetdown_local=true to use local files
2019-05-08 Ben SoaresJAL-3247 JAL-3254 changing default location of jalview...
2019-05-08 Ben SoaresJAL-3247 JAL-3254 Getdown now opening any files thrown...
2019-05-08 Ben SoaresJAL-3247 JAL-3254 Automatically creating correct file...
2019-05-08 Ben SoaresJAL-3247 JAL-3254 Automatically creating correct file...
2019-05-08 Ben SoaresJAL-3247 Script to produce auto file association files...
2019-05-08 Ben SoaresJAL-3247 Note in launcher.log when using a JVL file
2019-05-07 Ben SoaresJAL-3247 Changed JVL file to be a props file, with...
2019-05-07 Ben SoaresJAL-3247 Script to automatically install Jalview from...
2019-05-07 Ben SoaresJAL-3247 Auto generated file associations from jalview...
2019-05-06 Ben SoaresJAL-3247 Allowing 'file' protocol URL with empty domain...
2019-05-06 Ben SoaresJAL-3247 Code changes to getdown. Double click open...
2019-05-06 Ben SoaresJAL-3247 improvements
2019-05-06 Ben SoaresJAL-3247 Some getdown image file changes/tidying
2019-05-06 gmungocJAL-3240 known issue for release notes
2019-05-06 gmungocJAL-3239 release note
2019-05-06 gmungocJAL-3244 release note
2019-05-06 gmungocMerge remote-tracking branch 'origin/bug/JAL-3239monosp...
2019-05-06 gmungocJAL-3244 delete obsolete method
2019-05-03 Ben SoaresJAL-3247 First attempt at getdown code to add macOS...
2019-05-03 Ben SoaresJAL-3247 Part way towards adding double-click opening...
2019-05-02 Ben SoaresJAL-3247 Improved file associations on macOS and Windows
2019-05-02 gmungocJAL-3239 draw EPS or SVG one character at a time (even... bug/JAL-3239monospacedEps
2019-05-02 gmungocMerge branch 'bug/JAL-3244jmolWindows' into develop
2019-05-02 gmungocJAL-3244 renamed Platform method for clarity bug/JAL-3244jmolWindows
2019-05-02 Ben Soaresadding another getdown file (produced during a getdown...
2019-05-02 Ben SoaresJAL-3248 some progress on prerequesite installation...
2019-05-02 Ben SoaresJAL-3247 jvp jvl File associations, JRE variablised...
2019-05-01 Ben SoaresFixed -Djvl=true in install4j JVM invocation
2019-05-01 Ben SoaresExtra JVL file association in the installer. Shadowed...
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