jalview.git
2005-08-18 amwaterhouseProceed with upperCase residue Release_2_03
2005-08-18 jproctervarious case sensitivity bugs fixed in residue comparis...
2005-08-18 amwaterhouseUse aa index for aboveThreshold as well as colour index
2005-08-17 jprocterClient threads for discovered web services.
2005-08-17 jprocterGUI modifications for service discovery.
2005-08-17 jprocterGui Modifications for Service Discovery.
2005-08-17 jprocter<No Comment Entered>
2005-08-17 amwaterhouseHas version, Groups are optional, trees added to schema
2005-08-17 amwaterhouseAdd attribute schemeName
2005-08-17 amwaterhouseAdd buildPropertiesFile to applet jar
2005-08-17 amwaterhouseRead in version from build details file in applet jar
2005-08-17 amwaterhouseWeb Services moved from Calculate
2005-08-17 amwaterhouseCapitalise menus
2005-08-17 jprocterMaintain list of webservices and query any Service...
2005-08-17 jprocterSimple Registry Service stubs
2005-08-17 jprocterFixed basic name to sequence ID matching (bug dragonfly...
2005-08-17 amwaterhouseNo basicDirectoryModel on the Mac
2005-08-17 amwaterhouseSet size for mac users
2005-08-17 amwaterhouseError reply is kept separate from file type
2005-08-17 amwaterhouseAdd names to schemes
2005-08-17 amwaterhouseNew image
2005-08-17 amwaterhouseCheck default colour is not null
2005-08-17 amwaterhouseRemove user colour menu item
2005-08-17 amwaterhouseCheck default >0, not <1
2005-08-17 amwaterhouseConservation group colour saved
2005-08-17 amwaterhouseAdd SRS as default
2005-08-17 amwaterhouseReturn white userColourScheme, not null colourscheme
2005-08-17 amwaterhouseUse getDefault for exampleFile
2005-08-17 amwaterhouseAdvice on proxy servers
2005-08-17 amwaterhouseRebuilt with new schema
2005-08-17 amwaterhousePut basic file chooser test in try catch loop
2005-08-17 amwaterhouseScheme name added
2005-08-17 amwaterhouseUser colours have scheme name
2005-08-17 amwaterhouseUser colours
2005-08-17 amwaterhouseNo score colour scheme, group colours saved if conserva...
2005-08-17 amwaterhouseCalculation - consensus
2005-08-17 amwaterhouseupdateUserColourMenu
2005-08-17 amwaterhouseDiscover user colours
2005-08-16 amwaterhouseRemove redundant imports
2005-08-15 amwaterhouseJalview Version:
2005-08-15 amwaterhouseOutput java version, os version on startup
2005-08-15 amwaterhouseRemove null check
2005-08-15 amwaterhouseSparc for Solaris
2005-08-15 amwaterhouseUse default fileChooser for now
2005-08-15 amwaterhousesuper.setconsensus
2005-08-15 amwaterhousePercentage precalculated in aafrequency
2005-08-15 amwaterhouseisGap slightly more efficient
2005-08-15 amwaterhouseAdd taylor to default colour check
2005-08-15 amwaterhouseHashtable now in array, not vector
2005-08-15 amwaterhouseIgnoreGapsConsensus
2005-08-15 amwaterhouseDont color Checking... red
2005-08-15 amwaterhouseDeclare variables outside loops
2005-08-15 amwaterhouseCalculate gap and nogap ratio here
2005-08-12 jprocterfixed leafMapping bug for Id's like SequenceX (where...
2005-08-09 amwaterhouseAdd notes on proxy settings
2005-08-09 amwaterhouseInstallAnywhere readme
2005-08-09 amwaterhouseNew classes
2005-08-09 amwaterhouseCache.getDefault
2005-08-09 amwaterhouseProxy server, default browser, multiple links added
2005-08-09 amwaterhousecache.getDefault
2005-08-09 amwaterhouseTry/catch loading default icons
2005-08-09 amwaterhouseSplash screen is repainted when checking latest version
2005-08-09 amwaterhouseHandle multiple url links
2005-08-09 amwaterhouseCan give a name to new browser window
2005-08-09 amwaterhouseProperties file is used in preference to viewport/cache...
2005-08-09 amwaterhouseEdit/add/delete a sequence link
2005-08-09 amwaterhouseApplet handles multiple sequence links
2005-08-04 amwaterhouseAdd docs in build
2005-08-03 amwaterhouseFix for user entering number in search window
2005-08-03 amwaterhouseVersion 2.02
2005-08-03 amwaterhouse1 & -1
2005-08-03 amwaterhouseTrees aren't save in headless state in this version
2005-08-03 amwaterhouseLoading thread moved to io.FileLoader
2005-08-03 amwaterhouseUse Container to get fontMetrics
2005-08-03 amwaterhouseFileLoading removed from desktop
2005-08-03 amwaterhouseCan run headless=true
2005-08-02 amwaterhouseUse font.getName, not font.getFontName
2005-07-29 amwaterhouseRemove ref to ServletGUI
2005-07-29 amwaterhouseuse 1 & -1 if start/end not specified
2005-07-29 amwaterhouseif endRes <1, calc the endRes
2005-07-29 amwaterhouseCorrect label for end res in copy
2005-07-19 amwaterhousev2.02 Release_2_02
2005-07-18 amwaterhousebackslash irrelevant in java
2005-07-18 amwaterhouseCopy seq ordering bug fixed
2005-07-18 amwaterhouseOutput redirected to output.txt
2005-07-18 amwaterhouseRemove .txt, add command line instruction
2005-07-12 amwaterhousehomepage must have http:// at beginning
2005-07-11 amwaterhouseput jalview.jar first in jnlp Release_2_01
2005-07-11 amwaterhouseVersion changes
2005-07-11 amwaterhouseJnlp info updated
2005-07-11 amwaterhouseMust check if group.sequences are null in remove gaps
2005-07-11 amwaterhouseConsume if enter pressed
2005-07-11 amwaterhouseListen for return key
2005-07-11 amwaterhousecheck groupsize is non zero
2005-07-11 amwaterhousesetIconImage
2005-07-11 amwaterhousetypo
2005-07-11 amwaterhouseimage changed
2005-07-11 jprocteradded help and documentation for annotation editing.
2005-07-11 amwaterhouselibraries??
2005-07-11 amwaterhouseAdd test case if code version not found
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