source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	61	.cvsignore	blob \| history \| raw
-rwxr-xr-x	22799	AAFrequency.java	blob \| history \| raw
-rwxr-xr-x	26561	AlignSeq.java	blob \| history \| raw
-rw-r--r--	8184	AlignmentAnnotationUtils.java	blob \| history \| raw
-rwxr-xr-x	23318	AlignmentSorter.java	blob \| history \| raw
-rw-r--r--	98113	AlignmentUtils.java	blob \| history \| raw
-rw-r--r--	10838	AnnotationSorter.java	blob \| history \| raw
-rw-r--r--	3467	AverageDistanceTree.java	blob \| history \| raw
-rw-r--r--	3750	CodingUtils.java	blob \| history \| raw
-rw-r--r--	3103	CodonComparator.java	blob \| history \| raw
-rwxr-xr-x	22980	Conservation.java	blob \| history \| raw
-rw-r--r--	37130	CrossRef.java	blob \| history \| raw
-rw-r--r--	29158	Dna.java	blob \| history \| raw
-rw-r--r--	13065	Finder.java	blob \| history \| raw
-rw-r--r--	1240	GeneticCodeI.java	blob \| history \| raw
-rw-r--r--	11264	GeneticCodes.java	blob \| history \| raw
-rw-r--r--	11087	Grouping.java	blob \| history \| raw
-rw-r--r--	3426	NJTree.java	blob \| history \| raw
-rwxr-xr-x	6598	PCA.java	blob \| history \| raw
-rw-r--r--	5472	ParseProperties.java	blob \| history \| raw
-rw-r--r--	12094	Rna.java	blob \| history \| raw
-rw-r--r--	6211	SecStrConsensus.java	blob \| history \| raw
-rwxr-xr-x	8731	SeqsetUtils.java	blob \| history \| raw
-rwxr-xr-x	9225	SequenceIdMatcher.java	blob \| history \| raw
-rw-r--r--	13115	StructureFrequency.java	blob \| history \| raw
-rw-r--r--	10019	TreeBuilder.java	blob \| history \| raw
-rw-r--r--	15084	TreeModel.java	blob \| history \| raw
-rw-r--r--	1300	WUSSParseException.java	blob \| history \| raw
drwxr-xr-x	-	scoremodels	tree \| history