source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	61	.cvsignore	blob \| history \| raw
-rwxr-xr-x	22164	AAFrequency.java	blob \| history \| raw
-rwxr-xr-x	26561	AlignSeq.java	blob \| history \| raw
-rw-r--r--	8184	AlignmentAnnotationUtils.java	blob \| history \| raw
-rwxr-xr-x	23367	AlignmentSorter.java	blob \| history \| raw
-rw-r--r--	97348	AlignmentUtils.java	blob \| history \| raw
-rw-r--r--	10838	AnnotationSorter.java	blob \| history \| raw
-rw-r--r--	3467	AverageDistanceTree.java	blob \| history \| raw
-rw-r--r--	3437	CodingUtils.java	blob \| history \| raw
-rw-r--r--	3103	CodonComparator.java	blob \| history \| raw
-rwxr-xr-x	22841	Conservation.java	blob \| history \| raw
-rw-r--r--	36542	CrossRef.java	blob \| history \| raw
-rw-r--r--	28927	Dna.java	blob \| history \| raw
-rw-r--r--	13041	Finder.java	blob \| history \| raw
-rw-r--r--	11087	Grouping.java	blob \| history \| raw
-rw-r--r--	3426	NJTree.java	blob \| history \| raw
-rwxr-xr-x	5321	PCA.java	blob \| history \| raw
-rw-r--r--	5472	ParseProperties.java	blob \| history \| raw
-rw-r--r--	12112	Rna.java	blob \| history \| raw
-rw-r--r--	6211	SecStrConsensus.java	blob \| history \| raw
-rwxr-xr-x	8731	SeqsetUtils.java	blob \| history \| raw
-rwxr-xr-x	9223	SequenceIdMatcher.java	blob \| history \| raw
-rw-r--r--	13506	StructureFrequency.java	blob \| history \| raw
-rw-r--r--	10019	TreeBuilder.java	blob \| history \| raw
-rw-r--r--	15084	TreeModel.java	blob \| history \| raw
-rw-r--r--	1300	WUSSParseException.java	blob \| history \| raw
drwxr-xr-x	-	scoremodels	tree \| history