source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	61	.cvsignore	blob \| history \| raw
-rwxr-xr-x	22175	AAFrequency.java	blob \| history \| raw
-rwxr-xr-x	26465	AlignSeq.java	blob \| history \| raw
-rw-r--r--	8207	AlignmentAnnotationUtils.java	blob \| history \| raw
-rwxr-xr-x	24173	AlignmentSorter.java	blob \| history \| raw
-rw-r--r--	93595	AlignmentUtils.java	blob \| history \| raw
-rw-r--r--	10824	AnnotationSorter.java	blob \| history \| raw
-rw-r--r--	2603	AverageDistanceTree.java	blob \| history \| raw
-rw-r--r--	3437	CodingUtils.java	blob \| history \| raw
-rw-r--r--	3103	CodonComparator.java	blob \| history \| raw
-rwxr-xr-x	22881	Conservation.java	blob \| history \| raw
-rw-r--r--	36670	CrossRef.java	blob \| history \| raw
-rw-r--r--	28849	Dna.java	blob \| history \| raw
-rw-r--r--	9304	Finder.java	blob \| history \| raw
-rw-r--r--	11087	Grouping.java	blob \| history \| raw
-rw-r--r--	3416	NJTree.java	blob \| history \| raw
-rwxr-xr-x	5312	PCA.java	blob \| history \| raw
-rw-r--r--	5469	ParseProperties.java	blob \| history \| raw
-rw-r--r--	12096	Rna.java	blob \| history \| raw
-rw-r--r--	6211	SecStrConsensus.java	blob \| history \| raw
-rwxr-xr-x	8992	SeqsetUtils.java	blob \| history \| raw
-rwxr-xr-x	9182	SequenceIdMatcher.java	blob \| history \| raw
-rw-r--r--	13434	StructureFrequency.java	blob \| history \| raw
-rw-r--r--	9217	TreeBuilder.java	blob \| history \| raw
-rw-r--r--	14686	TreeModel.java	blob \| history \| raw
-rw-r--r--	1300	WUSSParseException.java	blob \| history \| raw
drwxr-xr-x	-	scoremodels	tree \| history