source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	2985	AlignExportSettings.java	blob \| history \| raw
-rw-r--r--	177488	AlignFrame.java	blob \| history \| raw
-rw-r--r--	31356	AlignViewport.java	blob \| history \| raw
-rw-r--r--	48504	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	18559	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13968	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	26115	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	8642	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	32802	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	24776	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	10046	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	30455	AppJmol.java	blob \| history \| raw
-rw-r--r--	5023	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	19358	AppVarna.java	blob \| history \| raw
-rw-r--r--	13959	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	2710	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23281	BlogReader.java	blob \| history \| raw
-rw-r--r--	33288	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	16944	Console.java	blob \| history \| raw
-rw-r--r--	5973	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	9722	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	22974	DasSourceBrowser.java	blob \| history \| raw
-rw-r--r--	88650	Desktop.java	blob \| history \| raw
-rw-r--r--	4202	EPSOptions.java	blob \| history \| raw
-rw-r--r--	2800	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	15562	FeatureColourChooser.java	blob \| history \| raw
-rw-r--r--	12819	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	50638	FeatureSettings.java	blob \| history \| raw
-rwxr-xr-x	10087	Finder.java	blob \| history \| raw
-rwxr-xr-x	9378	FontChooser.java	blob \| history \| raw
-rw-r--r--	4163	HTMLOptions.java	blob \| history \| raw
-rw-r--r--	2771	Help.java	blob \| history \| raw
-rw-r--r--	1728	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1210	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	11762	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	12877	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3946	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	15064	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	168718	Jalview2XML.java	blob \| history \| raw
-rwxr-xr-x	15466	Jalview2XML_V1.java	blob \| history \| raw
-rw-r--r--	1932	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2984	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	3500	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	4229	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	8370	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	2883	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2606	OOMWarning.java	blob \| history \| raw
-rw-r--r--	24143	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1015	OptsParametersContainerI.java	blob \| history \| raw
-rwxr-xr-x	11311	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	19855	PCAPanel.java	blob \| history \| raw
-rw-r--r--	9357	PDBSearchPanel.java	blob \| history \| raw
-rwxr-xr-x	6330	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	3980	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	74712	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	32305	Preferences.java	blob \| history \| raw
-rw-r--r--	6957	ProgressBar.java	blob \| history \| raw
-rw-r--r--	6311	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7946	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7590	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15651	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	17208	RotatableCanvas.java	blob \| history \| raw
-rw-r--r--	4157	SVGOptions.java	blob \| history \| raw
-rwxr-xr-x	12701	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	23179	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	49221	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	26689	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	13927	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	8439	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9300	SplashScreen.java	blob \| history \| raw
-rw-r--r--	19919	SplitFrame.java	blob \| history \| raw
-rw-r--r--	29529	StructureChooser.java	blob \| history \| raw
-rw-r--r--	6235	StructureViewer.java	blob \| history \| raw
-rw-r--r--	13258	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	5986	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	24942	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	23368	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26966	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5317	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35317	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8281	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	22001	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43158	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	9961	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17563	WsPreferences.java	blob \| history \| raw