-Clazz.declarePackage ("jalview.datamodel");
-c$ = Clazz.decorateAsClass (function () {
-this.$element = null;
-this.name = null;
-this.$left = null;
-this.$right = null;
-this.$parent = null;
-this.bootstrap = 0;
-Clazz.instantialize (this, arguments);
-}, jalview.datamodel, "BinaryNode");
-Clazz.makeConstructor (c$,
-function () {
-this.$left = this.$right = this.$parent = null;
-this.bootstrap = 0;
-});
-Clazz.makeConstructor (c$,
-function (element, parent, name) {
-this.$element = element;
-this.$parent = parent;
-this.name = name;
-this.$left = this.$right = null;
-}, "~O,jalview.datamodel.BinaryNode,~S");
-Clazz.defineMethod (c$, "element",
-function () {
-return this.$element;
-});
-Clazz.defineMethod (c$, "setElement",
-function (v) {
-return this.$element = v;
-}, "~O");
-Clazz.defineMethod (c$, "left",
-function () {
-return this.$left;
-});
-Clazz.defineMethod (c$, "setLeft",
-function (n) {
-return this.$left = n;
-}, "jalview.datamodel.BinaryNode");
-Clazz.defineMethod (c$, "right",
-function () {
-return this.$right;
-});
-Clazz.defineMethod (c$, "setRight",
-function (n) {
-return this.$right = n;
-}, "jalview.datamodel.BinaryNode");
-Clazz.defineMethod (c$, "parent",
-function () {
-return this.$parent;
-});
-Clazz.defineMethod (c$, "setParent",
-function (n) {
-return this.$parent = n;
-}, "jalview.datamodel.BinaryNode");
-Clazz.defineMethod (c$, "isLeaf",
-function () {
-return (this.$left == null) && (this.$right == null);
-});
-Clazz.defineMethod (c$, "SetChildren",
-function (leftchild, rightchild) {
-if (leftchild != null) {
-this.setLeft (leftchild);
-leftchild.detach ();
-leftchild.setParent (this);
-}if (rightchild != null) {
-this.setRight (rightchild);
-rightchild.detach ();
-rightchild.setParent (this);
-}}, "jalview.datamodel.BinaryNode,jalview.datamodel.BinaryNode");
-Clazz.defineMethod (c$, "detach",
-function () {
-if (this.$parent != null) {
-if (this.$parent.$left === this) {
-this.$parent.$left = null;
-} else {
-if (this.$parent.$right === this) {
-this.$parent.$right = null;
-}}}this.$parent = null;
-return this;
-});
-Clazz.defineMethod (c$, "ascendLeft",
-function () {
-var c = this;
-do {
-c = c.parent ();
-} while ((c != null) && (c.left () != null) && !c.left ().isLeaf ());
-return c;
-});
-Clazz.defineMethod (c$, "ascendRight",
-function () {
-var c = this;
-do {
-c = c.parent ();
-} while ((c != null) && (c.right () != null) && !c.right ().isLeaf ());
-return c;
-});
-Clazz.defineMethod (c$, "setName",
-function (name) {
-this.name = name;
-}, "~S");
-Clazz.defineMethod (c$, "getName",
-function () {
-return this.name;
-});
-Clazz.defineMethod (c$, "setBootstrap",
-function (boot) {
-this.bootstrap = boot;
-}, "~N");
-Clazz.defineMethod (c$, "getBootstrap",
-function () {
-return this.bootstrap;
-});
+Clazz.declarePackage ("jalview.datamodel");\r
+c$ = Clazz.decorateAsClass (function () {\r
+this.$element = null;\r
+this.name = null;\r
+this.$left = null;\r
+this.$right = null;\r
+this.$parent = null;\r
+this.bootstrap = 0;\r
+Clazz.instantialize (this, arguments);\r
+}, jalview.datamodel, "BinaryNode");\r
+Clazz.makeConstructor (c$, \r
+function () {\r
+this.$left = this.$right = this.$parent = null;\r
+this.bootstrap = 0;\r
+});\r
+Clazz.makeConstructor (c$, \r
+function (element, parent, name) {\r
+this.$element = element;\r
+this.$parent = parent;\r
+this.name = name;\r
+this.$left = this.$right = null;\r
+}, "~O,jalview.datamodel.BinaryNode,~S");\r
+Clazz.defineMethod (c$, "element", \r
+function () {\r
+return this.$element;\r
+});\r
+Clazz.defineMethod (c$, "setElement", \r
+function (v) {\r
+return this.$element = v;\r
+}, "~O");\r
+Clazz.defineMethod (c$, "left", \r
+function () {\r
+return this.$left;\r
+});\r
+Clazz.defineMethod (c$, "setLeft", \r
+function (n) {\r
+return this.$left = n;\r
+}, "jalview.datamodel.BinaryNode");\r
+Clazz.defineMethod (c$, "right", \r
+function () {\r
+return this.$right;\r
+});\r
+Clazz.defineMethod (c$, "setRight", \r
+function (n) {\r
+return this.$right = n;\r
+}, "jalview.datamodel.BinaryNode");\r
+Clazz.defineMethod (c$, "parent", \r
+function () {\r
+return this.$parent;\r
+});\r
+Clazz.defineMethod (c$, "setParent", \r
+function (n) {\r
+return this.$parent = n;\r
+}, "jalview.datamodel.BinaryNode");\r
+Clazz.defineMethod (c$, "isLeaf", \r
+function () {\r
+return (this.$left == null) && (this.$right == null);\r
+});\r
+Clazz.defineMethod (c$, "SetChildren", \r
+function (leftchild, rightchild) {\r
+if (leftchild != null) {\r
+this.setLeft (leftchild);\r
+leftchild.detach ();\r
+leftchild.setParent (this);\r
+}if (rightchild != null) {\r
+this.setRight (rightchild);\r
+rightchild.detach ();\r
+rightchild.setParent (this);\r
+}}, "jalview.datamodel.BinaryNode,jalview.datamodel.BinaryNode");\r
+Clazz.defineMethod (c$, "detach", \r
+function () {\r
+if (this.$parent != null) {\r
+if (this.$parent.$left === this) {\r
+this.$parent.$left = null;\r
+} else {\r
+if (this.$parent.$right === this) {\r
+this.$parent.$right = null;\r
+}}}this.$parent = null;\r
+return this;\r
+});\r
+Clazz.defineMethod (c$, "ascendLeft", \r
+function () {\r
+var c = this;\r
+do {\r
+c = c.parent ();\r
+} while ((c != null) && (c.left () != null) && !c.left ().isLeaf ());\r
+return c;\r
+});\r
+Clazz.defineMethod (c$, "ascendRight", \r
+function () {\r
+var c = this;\r
+do {\r
+c = c.parent ();\r
+} while ((c != null) && (c.right () != null) && !c.right ().isLeaf ());\r
+return c;\r
+});\r
+Clazz.defineMethod (c$, "setName", \r
+function (name) {\r
+this.name = name;\r
+}, "~S");\r
+Clazz.defineMethod (c$, "getName", \r
+function () {\r
+return this.name;\r
+});\r
+Clazz.defineMethod (c$, "setBootstrap", \r
+function (boot) {\r
+this.bootstrap = boot;\r
+}, "~N");\r
+Clazz.defineMethod (c$, "getBootstrap", \r
+function () {\r
+return this.bootstrap;\r
+});\r
git://source.jalview.org / jalviewjs.git / blobdiff