JAL-1807 still testing

[jalviewjs.git] / bin / jalview / datamodel / SequenceNode.js

diff --git a/bin/jalview/datamodel/SequenceNode.js b/bin/jalview/datamodel/SequenceNode.js
index 2069471..54cb491 100644 (file)
--- a/bin/jalview/datamodel/SequenceNode.js
+++ b/bin/jalview/datamodel/SequenceNode.js
@@ -1,64 +1,64 @@
-Clazz.declarePackage ("jalview.datamodel");
-Clazz.load (["jalview.datamodel.BinaryNode", "java.awt.Color"], "jalview.datamodel.SequenceNode", null, function () {
-c$ = Clazz.decorateAsClass (function () {
-this.dist = 0;
-this.count = 0;
-this.height = 0;
-this.ycount = 0;
-this.color = null;
-this.dummy = false;
-this.placeholder = false;
-Clazz.instantialize (this, arguments);
-}, jalview.datamodel, "SequenceNode", jalview.datamodel.BinaryNode);
-Clazz.prepareFields (c$, function () {
-this.color = java.awt.Color.black;
-});
-Clazz.makeConstructor (c$, 
-function (val, parent, dist, name) {
-Clazz.superConstructor (this, jalview.datamodel.SequenceNode, [val, parent, name]);
-this.dist = dist;
-}, "~O,jalview.datamodel.SequenceNode,~N,~S");
-Clazz.makeConstructor (c$, 
-function (val, parent, name, dist, bootstrap, dummy) {
-Clazz.superConstructor (this, jalview.datamodel.SequenceNode, [val, parent, name]);
-this.dist = dist;
-this.bootstrap = bootstrap;
-this.dummy = dummy;
-}, "~O,jalview.datamodel.SequenceNode,~S,~N,~N,~B");
-Clazz.defineMethod (c$, "isDummy", 
-function () {
-return this.dummy;
-});
-Clazz.defineMethod (c$, "isPlaceholder", 
-function () {
-return this.placeholder;
-});
-Clazz.defineMethod (c$, "setDummy", 
-function (newstate) {
-var oldstate = this.dummy;
-this.dummy = newstate;
-return oldstate;
-}, "~B");
-Clazz.defineMethod (c$, "setPlaceholder", 
-function (Placeholder) {
-this.placeholder = Placeholder;
-}, "~B");
-Clazz.defineMethod (c$, "AscendTree", 
-function () {
-var c = this;
-do {
-c = c.parent ();
-} while ((c != null) && c.dummy);
-return c;
-});
-Clazz.defineMethod (c$, "isSequenceLabel", 
-function () {
-if (this.name != null && this.name.length > 0) {
-for (var c = 0, s = this.name.length; c < s; c++) {
-var q = this.name.charAt (c);
-if ('0' <= q && q <= '9') continue;
-return true;
-}
-}return false;
-});
-});
+Clazz.declarePackage ("jalview.datamodel");\r
+Clazz.load (["jalview.datamodel.BinaryNode", "java.awt.Color"], "jalview.datamodel.SequenceNode", null, function () {\r
+c$ = Clazz.decorateAsClass (function () {\r
+this.dist = 0;\r
+this.count = 0;\r
+this.height = 0;\r
+this.ycount = 0;\r
+this.color = null;\r
+this.dummy = false;\r
+this.placeholder = false;\r
+Clazz.instantialize (this, arguments);\r
+}, jalview.datamodel, "SequenceNode", jalview.datamodel.BinaryNode);\r
+Clazz.prepareFields (c$, function () {\r
+this.color = java.awt.Color.black;\r
+});\r
+Clazz.makeConstructor (c$, \r
+function (val, parent, dist, name) {\r
+Clazz.superConstructor (this, jalview.datamodel.SequenceNode, [val, parent, name]);\r
+this.dist = dist;\r
+}, "~O,jalview.datamodel.SequenceNode,~N,~S");\r
+Clazz.makeConstructor (c$, \r
+function (val, parent, name, dist, bootstrap, dummy) {\r
+Clazz.superConstructor (this, jalview.datamodel.SequenceNode, [val, parent, name]);\r
+this.dist = dist;\r
+this.bootstrap = bootstrap;\r
+this.dummy = dummy;\r
+}, "~O,jalview.datamodel.SequenceNode,~S,~N,~N,~B");\r
+Clazz.defineMethod (c$, "isDummy", \r
+function () {\r
+return this.dummy;\r
+});\r
+Clazz.defineMethod (c$, "isPlaceholder", \r
+function () {\r
+return this.placeholder;\r
+});\r
+Clazz.defineMethod (c$, "setDummy", \r
+function (newstate) {\r
+var oldstate = this.dummy;\r
+this.dummy = newstate;\r
+return oldstate;\r
+}, "~B");\r
+Clazz.defineMethod (c$, "setPlaceholder", \r
+function (Placeholder) {\r
+this.placeholder = Placeholder;\r
+}, "~B");\r
+Clazz.defineMethod (c$, "AscendTree", \r
+function () {\r
+var c = this;\r
+do {\r
+c = c.parent ();\r
+} while ((c != null) && c.dummy);\r
+return c;\r
+});\r
+Clazz.defineMethod (c$, "isSequenceLabel", \r
+function () {\r
+if (this.name != null && this.name.length > 0) {\r
+for (var c = 0, s = this.name.length; c < s; c++) {\r
+var q = this.name.charAt (c);\r
+if ('0' <= q && q <= '9') continue;\r
+return true;\r
+}\r
+}return false;\r
+});\r
+});\r