JAL-1807 still testing

[jalviewjs.git] / bin / jalview / viewmodel / seqfeatures / FeaturesDisplayed.js

diff --git a/bin/jalview/viewmodel/seqfeatures/FeaturesDisplayed.js b/bin/jalview/viewmodel/seqfeatures/FeaturesDisplayed.js
index 32ddafc..8f0de99 100644 (file)
--- a/bin/jalview/viewmodel/seqfeatures/FeaturesDisplayed.js
+++ b/bin/jalview/viewmodel/seqfeatures/FeaturesDisplayed.js
@@ -1,68 +1,68 @@
-Clazz.declarePackage ("jalview.viewmodel.seqfeatures");
-Clazz.load (["jalview.api.FeaturesDisplayedI", "java.util.HashSet"], "jalview.viewmodel.seqfeatures.FeaturesDisplayed", null, function () {
-c$ = Clazz.decorateAsClass (function () {
-this.featuresDisplayed = null;
-this.featuresRegistered = null;
-Clazz.instantialize (this, arguments);
-}, jalview.viewmodel.seqfeatures, "FeaturesDisplayed", null, jalview.api.FeaturesDisplayedI);
-Clazz.prepareFields (c$, function () {
-this.featuresDisplayed =  new java.util.HashSet ();
-this.featuresRegistered =  new java.util.HashSet ();
-});
-Clazz.makeConstructor (c$, 
-function (featuresDisplayed2) {
-var fdisp = featuresDisplayed2.getVisibleFeatures ();
-var ftype;
-while (fdisp.hasNext ()) {
-ftype = fdisp.next ();
-this.featuresDisplayed.add (ftype);
-this.featuresRegistered.add (ftype);
-}
-}, "jalview.api.FeaturesDisplayedI");
-Clazz.makeConstructor (c$, 
-function () {
-});
-Clazz.defineMethod (c$, "getVisibleFeatures", 
-function () {
-return this.featuresDisplayed.iterator ();
-});
-Clazz.overrideMethod (c$, "isVisible", 
-function (featureType) {
-return this.featuresDisplayed.contains (featureType);
-}, "~S");
-Clazz.overrideMethod (c$, "areVisible", 
-function (featureTypes) {
-return this.featuresDisplayed.containsAll (featureTypes);
-}, "java.util.Collection");
-Clazz.overrideMethod (c$, "clear", 
-function () {
-this.featuresDisplayed.clear ();
-this.featuresRegistered.clear ();
-});
-Clazz.overrideMethod (c$, "setAllVisible", 
-function (makeVisible) {
-this.featuresDisplayed.addAll (makeVisible);
-this.featuresRegistered.addAll (makeVisible);
-}, "java.util.Collection");
-Clazz.overrideMethod (c$, "setAllRegisteredVisible", 
-function () {
-this.featuresDisplayed.addAll (this.featuresRegistered);
-});
-Clazz.overrideMethod (c$, "setVisible", 
-function (featureType) {
-this.featuresDisplayed.add (featureType);
-this.featuresRegistered.add (featureType);
-}, "~S");
-Clazz.overrideMethod (c$, "isRegistered", 
-function (type) {
-return this.featuresRegistered.contains (type);
-}, "~S");
-Clazz.overrideMethod (c$, "getVisibleFeatureCount", 
-function () {
-return this.featuresDisplayed.size ();
-});
-Clazz.overrideMethod (c$, "getRegisterdFeaturesCount", 
-function () {
-return this.featuresRegistered.size ();
-});
-});
+Clazz.declarePackage ("jalview.viewmodel.seqfeatures");\r
+Clazz.load (["jalview.api.FeaturesDisplayedI", "java.util.HashSet"], "jalview.viewmodel.seqfeatures.FeaturesDisplayed", null, function () {\r
+c$ = Clazz.decorateAsClass (function () {\r
+this.featuresDisplayed = null;\r
+this.featuresRegistered = null;\r
+Clazz.instantialize (this, arguments);\r
+}, jalview.viewmodel.seqfeatures, "FeaturesDisplayed", null, jalview.api.FeaturesDisplayedI);\r
+Clazz.prepareFields (c$, function () {\r
+this.featuresDisplayed =  new java.util.HashSet ();\r
+this.featuresRegistered =  new java.util.HashSet ();\r
+});\r
+Clazz.makeConstructor (c$, \r
+function (featuresDisplayed2) {\r
+var fdisp = featuresDisplayed2.getVisibleFeatures ();\r
+var ftype;\r
+while (fdisp.hasNext ()) {\r
+ftype = fdisp.next ();\r
+this.featuresDisplayed.add (ftype);\r
+this.featuresRegistered.add (ftype);\r
+}\r
+}, "jalview.api.FeaturesDisplayedI");\r
+Clazz.makeConstructor (c$, \r
+function () {\r
+});\r
+Clazz.defineMethod (c$, "getVisibleFeatures", \r
+function () {\r
+return this.featuresDisplayed.iterator ();\r
+});\r
+Clazz.overrideMethod (c$, "isVisible", \r
+function (featureType) {\r
+return this.featuresDisplayed.contains (featureType);\r
+}, "~S");\r
+Clazz.overrideMethod (c$, "areVisible", \r
+function (featureTypes) {\r
+return this.featuresDisplayed.containsAll (featureTypes);\r
+}, "java.util.Collection");\r
+Clazz.overrideMethod (c$, "clear", \r
+function () {\r
+this.featuresDisplayed.clear ();\r
+this.featuresRegistered.clear ();\r
+});\r
+Clazz.overrideMethod (c$, "setAllVisible", \r
+function (makeVisible) {\r
+this.featuresDisplayed.addAll (makeVisible);\r
+this.featuresRegistered.addAll (makeVisible);\r
+}, "java.util.Collection");\r
+Clazz.overrideMethod (c$, "setAllRegisteredVisible", \r
+function () {\r
+this.featuresDisplayed.addAll (this.featuresRegistered);\r
+});\r
+Clazz.overrideMethod (c$, "setVisible", \r
+function (featureType) {\r
+this.featuresDisplayed.add (featureType);\r
+this.featuresRegistered.add (featureType);\r
+}, "~S");\r
+Clazz.overrideMethod (c$, "isRegistered", \r
+function (type) {\r
+return this.featuresRegistered.contains (type);\r
+}, "~S");\r
+Clazz.overrideMethod (c$, "getVisibleFeatureCount", \r
+function () {\r
+return this.featuresDisplayed.size ();\r
+});\r
+Clazz.overrideMethod (c$, "getRegisterdFeaturesCount", \r
+function () {\r
+return this.featuresRegistered.size ();\r
+});\r
+});\r