}}var len = 72 - maxid - 1;\r
var nochunks = (Clazz.doubleToInt ((this.aseq1.length - this.count) / len)) + 1;\r
this.pid = 0;\r
}}var len = 72 - maxid - 1;\r
var nochunks = (Clazz.doubleToInt ((this.aseq1.length - this.count) / len)) + 1;\r
this.pid = 0;\r
this.output.append ("Length of alignment = ").append (String.valueOf (this.aseq1.length - this.count)).append (jalview.analysis.AlignSeq.NEWLINE);\r
this.output.append ("Sequence ");\r
this.output.append ( new jalview.util.Format ("%" + maxid + "s").form (this.s1.getName ()));\r
this.output.append ("Length of alignment = ").append (String.valueOf (this.aseq1.length - this.count)).append (jalview.analysis.AlignSeq.NEWLINE);\r
this.output.append ("Sequence ");\r
this.output.append ( new jalview.util.Format ("%" + maxid + "s").form (this.s1.getName ()));\r