websoft/data/blast/objprt.prt

   1 PrintTemplateSet ::= {
   2   {
   3     name "StdSeqDesc" ,
   4     format {
   5       asn1 "Seqdesc" ,
   6       form
   7         block {
   8           components {
   9             {
  10               asn1 "Seqdesc.mol-type" ,
  11               label "Molecule type" ,
  12               prefix "\n" ,
  13               form
  14                 enum {
  15                    } } ,
  16             {
  17               asn1 "Seqdesc.modif" ,
  18               label "Modifiers" ,
  19               prefix "\n" ,
  20               form
  21                 block {
  22                   separator ", " ,
  23                   components {
  24                     {
  25                       asn1 "Seqdesc.modif.E" ,
  26                       form
  27                         enum {
  28                            } } } } } ,
  29             {
  30               asn1 "Seqdesc.method" ,
  31               label "Method" ,
  32               prefix "\n" ,
  33               form
  34                 enum {
  35                    } } ,
  36             {
  37               asn1 "Seqdesc.name" ,
  38               label "Name" ,
  39               prefix "\n" ,
  40               form
  41                 text {
  42                    } } ,
  43             {
  44               asn1 "Seqdesc.title" ,
  45               label "Title" ,
  46               prefix "\n" ,
  47               form
  48                 text {
  49                    } } ,
  50             {
  51               asn1 "Seqdesc.org" ,
  52               label "Organism" ,
  53               prefix "\n" ,
  54               form
  55                 use-template "StdOrgRef" } ,
  56             {
  57               asn1 "Seqdesc.comment" ,
  58               label "Comment" ,
  59               prefix "\n" ,
  60               form
  61                 text {
  62                    } } ,
  63             {
  64               asn1 "Seqdesc.num" ,
  65               label "Numbering" ,
  66               prefix "\n" ,
  67               form
  68                 use-template "StdNumbering" } ,
  69             {
  70               asn1 "Seqdesc.maploc" ,
  71               label "Map location" ,
  72               prefix "\n" ,
  73               form
  74                 use-template "StdDbtag" } ,
  75             {
  76               asn1 "Seqdesc.pir" ,
  77               label "PIR block" ,
  78               prefix "\n" ,
  79               form
  80                 null NULL } ,
  81             {
  82               asn1 "Seqdesc.genbank" ,
  83               label "GenBank block" ,
  84               prefix "\n" ,
  85               form
  86                 use-template "StdGBBlock" } ,
  87             {
  88               asn1 "Seqdesc.pub" ,
  89               label "Citation" ,
  90               prefix "\n" ,
  91               form
  92                 use-template "StdPubdesc" } ,
  93             {
  94               asn1 "Seqdesc.region" ,
  95               label "Region" ,
  96               prefix "\n" ,
  97               form
  98                 text {
  99                    } } ,
 100             {
 101               asn1 "Seqdesc.user" ,
 102               label "User Type" ,
 103               prefix "\n" ,
 104               form
 105                 use-template "StdUserObj" } ,
 106             {
 107               asn1 "Seqdesc.sp" ,
 108               label "SWISS-PROT block" ,
 109               prefix "\n" ,
 110               form
 111                 null NULL } ,
 112             {
 113               asn1 "Seqdesc.dbxref" ,
 114               label "Cross reference" ,
 115               prefix "\n" ,
 116               form
 117                 use-template "StdDbtag"  } ,
 118             {
 119               asn1 "Seqdesc.embl" ,
 120               label "EMBL block" ,
 121               prefix "\n" ,
 122               form
 123                 null NULL } ,
 124             {
 125               asn1 "Seqdesc.create-date" ,
 126               label "Create date" ,
 127               prefix "\n" ,
 128               form
 129                 user {
 130                   printfunc "StdDatePrint" } } ,
 131             {
 132               asn1 "Seqdesc.update-date" ,
 133               label "Update date" ,
 134               prefix "\n" ,
 135               form
 136                 user {
 137                   printfunc "StdDatePrint" } } ,
 138             {
 139               asn1 "Seqdesc.prf" ,
 140               label "PRF block" ,
 141               prefix "\n" ,
 142               form
 143                 null NULL } ,
 144             {
 145               asn1 "Seqdesc.pdb" ,
 146               label "PDB block" ,
 147               prefix "\n" ,
 148               form
 149                 null NULL } ,
 150             {
 151               asn1 "Seqdesc.het" ,
 152               label "Heterogen" ,
 153               prefix "\n" ,
 154               form
 155                 text {
 156                    } } ,
 157             {
 158               asn1 "Seqdesc.source" ,
 159               label "Biological Source" ,
 160               prefix "\n" ,
 161               form
 162                 use-template "StdBioSource" } ,
 163             {
 164               asn1 "Seqdesc.molinfo" ,
 165               label "Molecule Information" ,
 166               prefix "\n" ,
 167               form
 168                 block {
 169                   separator ", " ,
 170                   components {
 171                     {
 172                       asn1 "MolInfo.biomol" ,
 173                       form
 174                         enum {
 175                            } } ,
 176                     {
 177                       asn1 "MolInfo.tech" ,
 178                       form
 179                         enum {
 180                            } } ,
 181                     {
 182                       asn1 "MolInfo.completeness" ,
 183                       form
 184                         enum {
 185                            } } } } } } } } } ,
 186   {
 187     name "StdSeqFeatLocation" ,
 188     format {
 189       asn1 "Seq-feat.location" ,
 190       label "Location" ,
 191       prefix "\t" ,
 192       form
 193         user {
 194           printfunc "StdSeqLocPrint" } } } ,
 195   {
 196     name "StdSeqFeatProduct" ,
 197     format {
 198       asn1 "Seq-feat.product" ,
 199       label "Product" ,
 200       prefix "\t" ,
 201       form
 202         user {
 203           printfunc "StdSeqLocPrint" } } } ,
 204   {
 205     name "EntrySeqFeatData" ,
 206     labelfrom "Seq-feat.data" ,
 207     format {
 208       asn1 "Seq-feat.data" ,
 209       prefix "\t" ,
 210       form
 211         use-template "StdSeqFeatData" } } ,
 212   {
 213     name "StdSeqFeat" ,
 214     labelfrom "Seq-feat.data" ,
 215     format {
 216       asn1 "Seq-feat" ,
 217       prefix "\n" ,
 218       suffix "\n" ,
 219       form
 220         block {
 221           separator "\n" ,
 222           components {
 223             {
 224               asn1 "Seq-feat.data" ,
 225               form
 226                 use-template "StdSeqFeatData" } ,
 227             {
 228               asn1 "Seq-feat" ,
 229               form
 230                 use-template "StdSeqFeatCommon" } ,
 231             {
 232               asn1 "Seq-feat.product" ,
 233               label "Product" ,
 234               prefix " " ,
 235               form
 236                 user {
 237                   printfunc "StdSeqLocPrint" } } ,
 238             {
 239               asn1 "Seq-feat.location" ,
 240               label "Location" ,
 241               prefix " " ,
 242               form
 243                 user {
 244                   printfunc "StdSeqLocPrint" } } ,
 245             {
 246               asn1 "Seq-feat.cit" ,
 247               label "Citations" ,
 248               prefix "\n" ,
 249               form
 250                 block {
 251                   separator "\n" ,
 252                   components {
 253                     {
 254                       asn1 "Seq-feat.cit.pub.E" ,
 255                       form
 256                         use-template "StdPub" } } } } ,
 257             {
 258               asn1 "Seq-feat.xref" ,
 259               label "Cross-reference" ,
 260               prefix "\n" ,
 261               form
 262                 block {
 263                   separator "\n" ,
 264                   components {
 265                     {
 266                       asn1 "Seq-feat.xref.E" ,
 267                       form
 268                         use-template "StdSeqFeatXref" } } } } } } } } ,
 269   {
 270     name "StdSeqFeatData" ,
 271     format {
 272       asn1 "SeqFeatData" ,
 273       form
 274         block {
 275           components {
 276             {
 277               asn1 "SeqFeatData.gene" ,
 278               label "Gene" ,
 279               form
 280                 use-template "StdGeneRef" } ,
 281             {
 282               asn1 "SeqFeatData.org" ,
 283               label "Organism" ,
 284               form
 285                 use-template "StdOrgRef" } ,
 286             {
 287               asn1 "SeqFeatData.cdregion" ,
 288               label "Coding Region" ,
 289               form
 290                 use-template "StdCdRegion" } ,
 291             {
 292               asn1 "SeqFeatData.prot" ,
 293               label "Protein" ,
 294               form
 295                 use-template "StdProtRef" } ,
 296             {
 297               asn1 "SeqFeatData.rna" ,
 298               label "RNA" ,
 299               form
 300                 use-template "StdRNARef" } ,
 301             {
 302               asn1 "SeqFeatData.pub" ,
 303               label "Citation" ,
 304               form
 305                 use-template "StdPubdesc" } ,
 306             {
 307               asn1 "SeqFeatData.seq" ,
 308               label "Sequence" ,
 309               form
 310                 user {
 311                   printfunc "StdSeqLocPrint" } } ,
 312             {
 313               asn1 "SeqFeatData.imp.key" ,
 314               label "Import" ,
 315               form
 316                 use-template "StdImpFeat" } ,
 317             {
 318               asn1 "SeqFeatData.region" ,
 319               label "Region" ,
 320               form
 321                 text {
 322                    } } ,
 323             {
 324               asn1 "SeqFeatData.comment" ,
 325               label "Comment" ,
 326               form
 327                 null NULL } ,
 328             {
 329               asn1 "SeqFeatData.bond" ,
 330               label "Bond" ,
 331               form
 332                 enum {
 333                    } } ,
 334             {
 335               asn1 "SeqFeatData.site" ,
 336               label "Site" ,
 337               form
 338                 enum {
 339                    } } ,
 340             {
 341               asn1 "SeqFeatData.rsite" ,
 342               label "Rest. Site" ,
 343               form
 344                 use-template "StdRsiteRef" } ,
 345             {
 346               asn1 "SeqFeatData.user" ,
 347               label "User Type" ,
 348               form
 349                 use-template "StdUserObj" } ,
 350             {
 351               asn1 "SeqFeatData.txinit" ,
 352               label "TxInit" ,
 353               form
 354                 use-template "StdTxInit" } ,
 355             {
 356               asn1 "SeqFeatData.num" ,
 357               label "Numbering" ,
 358               form
 359                 use-template "StdNumbering" } ,
 360             {
 361               asn1 "SeqFeatData.psec-str" ,
 362               label "Sec. Struct" ,
 363               form
 364                 enum {
 365                    } } ,
 366             {
 367               asn1 "SeqFeatData.non-std-residue" ,
 368               label "NonStd Residue" ,
 369               form
 370                 text {
 371                    } } ,
 372             {
 373               asn1 "SeqFeatData.het" ,
 374               label "Heterogen" ,
 375               form
 376                 text {
 377                    } } ,
 378             {
 379               asn1 "SeqFeatData.biosrc" ,
 380               label "Biological Source" ,
 381               prefix "\n" ,
 382               form
 383                 use-template "StdBioSource" } } } } } ,
 384   {
 385     name "StdGeneRef" ,
 386     format {
 387       asn1 "Gene-ref" ,
 388       form
 389         block {
 390           separator "\n" ,
 391           components {
 392             {
 393               asn1 "Gene-ref" ,
 394               form
 395                 block {
 396                   components {
 397                     {
 398                       asn1 "Gene-ref.locus" ,
 399                       form
 400                         text {
 401                            } } ,
 402                     {
 403                       asn1 "Gene-ref.allele" ,
 404                       prefix " " ,
 405                       form
 406                         text {
 407                            } } } } } ,
 408             {
 409               asn1 "Gene-ref.desc" ,
 410               prefix "[" ,
 411               suffix "]" ,
 412               form
 413                 text {
 414                    } } ,
 415             {
 416               asn1 "Gene-ref.pseudo" ,
 417               form
 418                 boolean {
 419                   true "This is a pseudogene." } } ,
 420             {
 421               asn1 "Gene-ref.syn" ,
 422               label "Synonyms" ,
 423               prefix " (" ,
 424               suffix ")" ,
 425               form
 426                 block {
 427                   separator ", " ,
 428                   components {
 429                     {
 430                       asn1 "Gene-ref.syn.E" ,
 431                       form
 432                         text {
 433                            } } } } } ,
 434             {
 435               asn1 "Gene-ref.maploc" ,
 436               label "Map Location" ,
 437               prefix " " ,
 438               form
 439                 text {
 440                    } } ,
 441             {
 442               asn1 "Gene-ref.db" ,
 443               label "Cross Reference" ,
 444               prefix " " ,
 445               form
 446                 block {
 447                   separator ", " ,
 448                   components {
 449                     {
 450                       asn1 "Gene-ref.db.E" ,
 451                       prefix "(" ,
 452                       suffix ")" ,
 453                       form
 454                         use-template "StdDbtag" } } } } } } } } ,
 455   {
 456     name "StdUserObj" ,
 457     format {
 458       asn1 "User-object" ,
 459       label "User-object" ,
 460       prefix "\n" ,
 461       form
 462         block {
 463           separator ": " ,
 464           components {
 465             {
 466               asn1 "User-object.class" ,
 467               form
 468                 text {
 469                    } } ,
 470             {
 471               asn1 "User-object.type" ,
 472               form
 473                 use-template "StdObjectId" } } } } } ,
 474   {
 475     name "StdPubOnFeat" ,
 476     format {
 477       asn1 "Pub" ,
 478       label "Citation" ,
 479       prefix "\n" ,
 480       form
 481         block {
 482           separator "\n" ,
 483           components {
 484             {
 485               asn1 "Pub" ,
 486               form
 487                 use-template "StdPub" } } } } } ,
 488   {
 489     name "StdPub" ,
 490     format {
 491       asn1 "Pub" ,
 492       form
 493         block {
 494           separator "\n" ,
 495           components {
 496             {
 497               asn1 "Pub.gen" ,
 498               form
 499                 use-template "StdCitGen" } ,
 500             {
 501               asn1 "Pub.sub" ,
 502               form
 503                 use-template "StdCitSub" } ,
 504             {
 505               asn1 "Pub.medline" ,
 506               form
 507                 use-template "StdMedlineEntry" } ,
 508             {
 509               asn1 "Pub.muid" ,
 510               label "MEDLINE uid: " ,
 511               form
 512                 text {
 513                    } } ,
 514             {
 515               asn1 "Pub.pmid" ,
 516               label "PubMed id: " ,
 517               form
 518                 text {
 519                    } } ,
 520             {
 521               asn1 "Pub.article" ,
 522               form
 523                 use-template "StdCitArt" } ,
 524             {
 525               asn1 "Pub.journal" ,
 526               form
 527                 use-template "StdCitJour" } ,
 528             {
 529               asn1 "Pub.book" ,
 530               form
 531                 use-template "StdCitBook" } ,
 532             {
 533               asn1 "Pub.proc" ,
 534               form
 535                 use-template "StdCitProc" } ,
 536             {
 537               asn1 "Pub.patent" ,
 538               form
 539                 use-template "StdCitPat" } ,
 540             {
 541               asn1 "Pub.pat-id" ,
 542               form
 543                 use-template "StdIdPat" } ,
 544             {
 545               asn1 "Pub.man" ,
 546               form
 547                 use-template "StdCitLet" } ,
 548             {
 549               asn1 "Pub.equiv" ,
 550               form
 551                 use-template "StdPubEquiv" } } } } } ,
 552   {
 553     name "StdCitGen" ,
 554     format {
 555       asn1 "Cit-gen" ,
 556       form
 557         block {
 558           separator "\n" ,
 559           components {
 560             {
 561               asn1 "Cit-gen.serial-number" ,
 562               prefix "[" ,
 563               suffix "]" ,
 564               form
 565                 text {
 566                    } } ,
 567             {
 568               asn1 "Cit-gen.authors" ,
 569               form
 570                 use-template "StdAuthList" } ,
 571             {
 572               asn1 "Cit-gen.date" ,
 573               prefix "(" ,
 574               suffix ")" ,
 575               form
 576                 user {
 577                   printfunc "StdDatePrint" } } ,
 578             {
 579               asn1 "Cit-gen.title" ,
 580               form
 581                 text {
 582                    } } ,
 583             {
 584               asn1 "Cit-gen.cit" ,
 585               form
 586                 text {
 587                    } } ,
 588             {
 589               asn1 "Cit-gen" ,
 590               form
 591                 block {
 592                   separator " " ,
 593                   components {
 594                     {
 595                       asn1 "Cit-gen.journal" ,
 596                       suffix ":" ,
 597                       form
 598                         use-template "StdTitle" } ,
 599                     {
 600                       asn1 "Cit-gen.issue" ,
 601                       suffix ";" ,
 602                       form
 603                         text {
 604                            } } ,
 605                     {
 606                       asn1 "Cit-gen.pages" ,
 607                       form
 608                         text {
 609                            } } } } } } } } } ,
 610   {
 611     name "StdCitSub" ,
 612     format {
 613       asn1 "Cit-sub" ,
 614       prefix "Data Submission " ,
 615       form
 616         block {
 617           components {
 618             {
 619               asn1 "Cit-sub.medium" ,
 620               prefix "on " ,
 621               suffix " " ,
 622               form
 623                 enum {
 624                    } } ,
 625             {
 626               asn1 "Cit-sub.imp.date" ,
 627               prefix "(" ,
 628               suffix ")" ,
 629               form
 630                 user {
 631                   printfunc "StdDatePrint" } } ,
 632             {
 633               asn1 "Cit-sub.authors" ,
 634               prefix "\n" ,
 635               form
 636                 use-template "StdAuthList" } } } } } ,
 637   {
 638     name "StdMedlineEntry" ,
 639     format {
 640       asn1 "Medline-entry" ,
 641       form
 642         block {
 643           separator "\n" ,
 644           components {
 645             {
 646               asn1 "Medline-entry" ,
 647               form
 648                 block {
 649                   separator "   " ,
 650                   components {
 651                     {
 652                       asn1 "Medline-entry.uid" ,
 653                       label "uid" ,
 654                       prefix ": " ,
 655                       form
 656                         text {
 657                            } } ,
 658                     {
 659                       asn1 "Medline-entry.em" ,
 660                       label "entry month" ,
 661                       prefix ": " ,
 662                       form
 663                         user {
 664                           printfunc "StdDatePrint" } } } } } ,
 665             {
 666               asn1 "Medline-entry.cit" ,
 667               form
 668                 use-template "StdCitArt" } ,
 669             {
 670               asn1 "Medline-entry.abstract" ,
 671               label "abstract" ,
 672               prefix ": " ,
 673               form
 674                 text {
 675                    } } ,
 676             {
 677               asn1 "Medline-entry.mesh" ,
 678               label "Mesh Terms" ,
 679               prefix "\n" ,
 680               form
 681                 block {
 682                   separator "\n" ,
 683                   components {
 684                     {
 685                       asn1 "Medline-entry.mesh.E" ,
 686                       form
 687                         block {
 688                           components {
 689                             {
 690                               asn1 "Medline-mesh.term" ,
 691                               form
 692                                 text {
 693                                    } } ,
 694                             {
 695                               asn1 "Medline-mesh.mp" ,
 696                               form
 697                                 boolean {
 698                                   true " (Main Point)" } } ,
 699                             {
 700                               asn1 "Medline-mesh.qual" ,
 701                               form
 702                                 block {
 703                                   separator "\n" ,
 704                                   components {
 705                                     {
 706                                       asn1 "Medline-mesh.qual.E" ,
 707                                       form
 708                                         block {
 709                                           components {
 710                                             {
 711                                               asn1 "Medline-qual.subh" ,
 712                                               form
 713                                                 text {
 714                                                    } } ,
 715                                             {
 716                                               asn1 "Medline-qual.mp" ,
 717                                               form
 718                                                 boolean {
 719                                                   true " (Main Point)" } } } } } } } } } } } } } } ,
 720             {
 721               asn1 "Medline-entry.substance" ,
 722               label "Substance" ,
 723               prefix "\n" ,
 724               form
 725                 block {
 726                   separator "\n" ,
 727                   components {
 728                     {
 729                       asn1 "Medline-entry.substance.E" ,
 730                       form
 731                         block {
 732                           components {
 733                             {
 734                               asn1 "Medline-rn.name" ,
 735                               form
 736                                 text {
 737                                    } } ,
 738                             {
 739                               asn1 "Medline-rn.type" ,
 740                               form
 741                                 enum {
 742                                   values {
 743                                     "" ,
 744                                     " CAS: " ,
 745                                     "EC " } } } ,
 746                             {
 747                               asn1 "Medline-rn.cit" ,
 748                               form
 749                                 text {
 750                                    } } } } } } } } ,
 751             {
 752               asn1 "Medline-entry.xref" ,
 753               label "Cross Reference" ,
 754               prefix "\n" ,
 755               form
 756                 block {
 757                   separator "\n" ,
 758                   components {
 759                     {
 760                       asn1 "Medline-entry.xref.E" ,
 761                       form
 762                         block {
 763                           separator ": " ,
 764                           components {
 765                             {
 766                               asn1 "Medline-si.type" ,
 767                               form
 768                                 enum {
 769                                    } } ,
 770                             {
 771                               asn1 "Medline-si.cit" ,
 772                               form
 773                                 text {
 774                                    } } } } } } } } ,
 775             {
 776               asn1 "Medline-entry.gene" ,
 777               label "Possible Gene Symbols" ,
 778               prefix ": " ,
 779               form
 780                 block {
 781                   separator ", " ,
 782                   components {
 783                     {
 784                       asn1 "Medline-entry.gene.E" ,
 785                       form
 786                         text {
 787                            } } } } } ,
 788             {
 789               asn1 "Medline-entry.idnum" ,
 790               label "Support" ,
 791               prefix ": " ,
 792               form
 793                 block {
 794                   separator ", " ,
 795                   components {
 796                     {
 797                       asn1 "Medline-entry.idnum.E" ,
 798                       form
 799                         text {
 800                            } } } } } } } } } ,
 801   {
 802     name "StdCitArt" ,
 803     format {
 804       asn1 "Cit-art" ,
 805       form
 806         block {
 807           separator "\n" ,
 808           components {
 809             {
 810               asn1 "Cit-art.title" ,
 811               form
 812                 use-template "StdTitle" } ,
 813             {
 814               asn1 "Cit-art.authors" ,
 815               form
 816                 use-template "StdAuthList" } ,
 817             {
 818               asn1 "Cit-art.from.journal" ,
 819               form
 820                 use-template "StdCitJour" } ,
 821             {
 822               asn1 "Cit-art.from.book" ,
 823               prefix "(in) " ,
 824               form
 825                 use-template "StdCitBook" } ,
 826             {
 827               asn1 "Cit-art.from.proc" ,
 828               prefix "(in) " ,
 829               form
 830                 use-template "StdCitProc" } } } } } ,
 831   {
 832     name "StdCitJour" ,
 833     format {
 834       asn1 "Cit-jour" ,
 835       form
 836         block {
 837           separator " " ,
 838           components {
 839             {
 840               asn1 "Cit-jour.title" ,
 841               form
 842                 use-template "StdTitle" } ,
 843             {
 844               asn1 "Cit-jour.imp" ,
 845               form
 846                 use-template "StdImprint" } } } } } ,
 847   {
 848     name "StdCitBook" ,
 849     format {
 850       asn1 "Cit-book" ,
 851       form
 852         block {
 853           separator "\n" ,
 854           components {
 855             {
 856               asn1 "Cit-book.title" ,
 857               form
 858                 use-template "StdTitle" } ,
 859             {
 860               asn1 "Cit-book.coll" ,
 861               prefix "Collection: " ,
 862               form
 863                 use-template "StdTitle" } ,
 864             {
 865               asn1 "Cit-book.authors" ,
 866               form
 867                 use-template "StdAuthList" } ,
 868             {
 869               asn1 "Cit-book.imp" ,
 870               form
 871                 use-template "StdImprint" } } } } } ,
 872   {
 873     name "StdCitProc" ,
 874     format {
 875       asn1 "Cit-proc" ,
 876       form
 877         block {
 878           separator "\n" ,
 879           components {
 880             {
 881               asn1 "Cit-proc.book" ,
 882               form
 883                 use-template "StdCitBook" } ,
 884             {
 885               asn1 "Cit-proc.meet" ,
 886               label "Meeting " ,
 887               form
 888                 block {
 889                   separator ", " ,
 890                   components {
 891                     {
 892                       asn1 "Meeting.number" ,
 893                       form
 894                         text {
 895                            } } ,
 896                     {
 897                       asn1 "Meeting.date" ,
 898                       form
 899                         user {
 900                           printfunc "StdDatePrint" } } ,
 901                     {
 902                       asn1 "Meeting.place" ,
 903                       form
 904                         use-template "StdAffil" } } } } } } } } ,
 905   {
 906     name "StdCitPat" ,
 907     format {
 908       asn1 "Cit-pat" ,
 909       form
 910         block {
 911           separator "\n" ,
 912           components {
 913             {
 914               asn1 "Cit-pat.title" ,
 915               form
 916                 text {
 917                    } } ,
 918             {
 919               asn1 "Cit-pat.authors" ,
 920               form
 921                 use-template "StdAuthList" } ,
 922             {
 923               asn1 "Cit-pat" ,
 924               form
 925                 block {
 926                   components {
 927                     {
 928                       asn1 "Cit-pat.country" ,
 929                       suffix " " ,
 930                       form
 931                         text {
 932                            } } ,
 933                     {
 934                       asn1 "Cit-pat.doc-type" ,
 935                       form
 936                         text {
 937                            } } ,
 938                     {
 939                       asn1 "Cit-pat.number" ,
 940                       form
 941                         text {
 942                            } } ,
 943                     {
 944                       asn1 "Cit-pat.date-issue" ,
 945                       prefix " (" ,
 946                       suffix ")" ,
 947                       form
 948                         user {
 949                           printfunc "StdDatePrint" } } ,
 950                     {
 951                       asn1 "Cit-pat.app-number" ,
 952                       prefix " Appl: " ,
 953                       form
 954                         text {
 955                            } } ,
 956                     {
 957                       asn1 "Cit-pat.app-date" ,
 958                       prefix " (" ,
 959                       suffix ")" ,
 960                       form
 961                         user {
 962                           printfunc "StdDatePrint" } } } } } } } } } ,
 963   {
 964     name "StdIdPat" ,
 965     format {
 966       asn1 "Id-pat" ,
 967       form
 968         block {
 969           components {
 970             {
 971               asn1 "Id-pat.country" ,
 972               suffix " " ,
 973               form
 974                 text {
 975                    } } ,
 976             {
 977               asn1 "Id-pat.id.number" ,
 978               form
 979                 text {
 980                    } } ,
 981             {
 982               asn1 "Id-pat.id.app-number" ,
 983               prefix "Appl: " ,
 984               form
 985                 text {
 986                    } } } } } } ,
 987   {
 988     name "StdCitLet" ,
 989     format {
 990       asn1 "Cit-let" ,
 991       form
 992         block {
 993           separator "\n" ,
 994           components {
 995             {
 996               asn1 "Cit-let.type" ,
 997               prefix "[" ,
 998               suffix "]" ,
 999               form
1000                 enum {
1001                    } } ,
1002             {
1003               asn1 "Cit-let.man-id" ,
1004               form
1005                 text {
1006                    } } ,
1007             {
1008               asn1 "Cit-let.cit" ,
1009               form
1010                 use-template "StdCitBook" } } } } } ,
1011   {
1012     name "StdPubEquiv" ,
1013     format {
1014       asn1 "Pub-equiv" ,
1015       form
1016         block {
1017           separator "\n" ,
1018           components {
1019             {
1020               asn1 "Pub-equiv.E" ,
1021               form
1022                 use-template "StdPub" } } } } } ,
1023   {
1024     name "StdTitle" ,
1025     format {
1026       asn1 "Title" ,
1027       form
1028         block {
1029           separator ", " ,
1030           components {
1031             {
1032               asn1 "Title.E.trans" ,
1033               prefix "[" ,
1034               suffix "]" ,
1035               form
1036                 text {
1037                    } } ,
1038             {
1039               asn1 "Title.E.name" ,
1040               form
1041                 text {
1042                    } } ,
1043             {
1044               asn1 "Title.E.tsub" ,
1045               form
1046                 text {
1047                    } } ,
1048             {
1049               asn1 "Title.E.abr" ,
1050               form
1051                 text {
1052                    } } ,
1053             {
1054               asn1 "Title.E.iso-jta" ,
1055               form
1056                 text {
1057                    } } ,
1058             {
1059               asn1 "Title.E.ml-jta" ,
1060               label "MEDLINE" ,
1061               prefix ": " ,
1062               form
1063                 text {
1064                    } } ,
1065             {
1066               asn1 "Title.E.jta" ,
1067               label "jta" ,
1068               prefix ": " ,
1069               form
1070                 text {
1071                    } } ,
1072             {
1073               asn1 "Title.E.issn" ,
1074               label "ISSN" ,
1075               prefix ": " ,
1076               form
1077                 text {
1078                    } } ,
1079             {
1080               asn1 "Title.E.coden" ,
1081               label "CODEN" ,
1082               prefix ": " ,
1083               form
1084                 text {
1085                    } } ,
1086             {
1087               asn1 "Title.E.isbn" ,
1088               label "ISBN" ,
1089               prefix ": " ,
1090               form
1091                 text {
1092                    } } } } } } ,
1093   {
1094     name "StdAuthList" ,
1095     format {
1096       asn1 "Auth-list" ,
1097       form
1098         block {
1099           separator "\n" ,
1100           components {
1101             {
1102               asn1 "Auth-list" ,
1103               form
1104                 user {
1105                   printfunc "StdAuthListNamesPrint" } } ,
1106             {
1107               asn1 "Auth-list.affil" ,
1108               form
1109                 use-template "StdAffil" } } } } } ,
1110   {
1111     name "StdAffil" ,
1112     format {
1113       asn1 "Affil" ,
1114       form
1115         block {
1116           separator "\n" ,
1117           components {
1118             {
1119               asn1 "Affil.str" ,
1120               form
1121                 text {
1122                    } } ,
1123             {
1124               asn1 "Affil.std.affil" ,
1125               form
1126                 text {
1127                    } } ,
1128             {
1129               asn1 "Affil.std.div" ,
1130               form
1131                 text {
1132                    } } ,
1133             {
1134               asn1 "Affil.std.street" ,
1135               form
1136                 text {
1137                    } } ,
1138             {
1139               asn1 "Affil.std" ,
1140               form
1141                 block {
1142                   separator " " ,
1143                   components {
1144                     {
1145                       asn1 "Affil.std.city" ,
1146                       form
1147                         text {
1148                            } } ,
1149                     {
1150                       asn1 "Affil.std.sub" ,
1151                       form
1152                         text {
1153                            } } ,
1154                     {
1155                       asn1 "Affil.std.country" ,
1156                       form
1157                         text {
1158                            } } } } } } } } } ,
1159   {
1160     name "StdImprint" ,
1161     format {
1162       asn1 "Imprint" ,
1163       form
1164         block {
1165           components {
1166             {
1167               asn1 "Imprint.date" ,
1168               prefix "(" ,
1169               suffix ") " ,
1170               form
1171                 user {
1172                   printfunc "StdDatePrint" } } ,
1173             {
1174               asn1 "Imprint.volume" ,
1175               form
1176                 text {
1177                    } } ,
1178             {
1179               asn1 "Imprint.issue" ,
1180               prefix " (" ,
1181               suffix ")" ,
1182               form
1183                 text {
1184                    } } ,
1185             {
1186               asn1 "Imprint.section" ,
1187               prefix " (" ,
1188               suffix ")" ,
1189               form
1190                 text {
1191                    } } ,
1192             {
1193               asn1 "Imprint.part-sup" ,
1194               prefix " (" ,
1195               suffix ")" ,
1196               form
1197                 text {
1198                    } } ,
1199             {
1200               asn1 "Imprint.pages" ,
1201               prefix ": " ,
1202               form
1203                 text {
1204                    } } ,
1205             {
1206               asn1 "Imprint.prepub" ,
1207               prefix " (" ,
1208               suffix ")" ,
1209               form
1210                 enum {
1211                    } } ,
1212             {
1213               asn1 "Imprint.pub" ,
1214               label "\nPublisher: " ,
1215               form
1216                 use-template "StdAffil" } ,
1217             {
1218               asn1 "Imprint.cprt" ,
1219               label " Copyright: " ,
1220               form
1221                 user {
1222                   printfunc "StdDatePrint" } } } } } } ,
1223   {
1224     name "StdSeqFeatXref" ,
1225     format {
1226       asn1 "SeqFeatXref" ,
1227       form
1228         block {
1229           separator "\n" ,
1230           components {
1231             {
1232               asn1 "SeqFeatXref.id" ,
1233               label "Id=" ,
1234               form
1235                 use-template "StdFeatId" } ,
1236             {
1237               asn1 "SeqFeatXref.data" ,
1238               form
1239                 use-template "StdSeqFeatData" } } } } } ,
1240   {
1241     name "StdOrgRef" ,
1242     format {
1243       asn1 "Org-ref" ,
1244       label "Org-ref" ,
1245       prefix "\n" ,
1246       form
1247         block {
1248           separator "\n" ,
1249           components {
1250             {
1251               asn1 "Org-ref" ,
1252               form
1253                 block {
1254                   separator " " ,
1255                   components {
1256                     {
1257                       asn1 "Org-ref.taxname" ,
1258                       form
1259                         text {
1260                            } } ,
1261                     {
1262                       asn1 "Org-ref.common" ,
1263                       prefix "(" ,
1264                       suffix ")" ,
1265                       form
1266                         text {
1267                            } } } } } ,
1268             {
1269               asn1 "Org-ref.mod" ,
1270               label "Modifiers" ,
1271               prefix " (" ,
1272               suffix ")" ,
1273               form
1274                 block {
1275                   separator ", " ,
1276                   components {
1277                     {
1278                       asn1 "Org-ref.mod.E" ,
1279                       form
1280                         text {
1281                            } } } } } ,
1282             {
1283               asn1 "Org-ref.db" ,
1284               label "Cross Reference" ,
1285               prefix " " ,
1286               form
1287                 block {
1288                   separator ", " ,
1289                   components {
1290                     {
1291                       asn1 "Org-ref.db.E" ,
1292                       prefix "(" ,
1293                       suffix ")" ,
1294                       form
1295                         use-template "StdDbtag" } } } } ,
1296             {
1297               asn1 "Org-ref.syn" ,
1298               label "Synonyms" ,
1299               prefix " (" ,
1300               suffix ")" ,
1301               form
1302                 block {
1303                   separator ", " ,
1304                   components {
1305                     {
1306                       asn1 "Org-ref.syn.E" ,
1307                       form
1308                         text {
1309                            } } } } } } } } } ,
1310   {
1311     name "StdBioSource" ,
1312     format {
1313       asn1 "BioSource" ,
1314       label "BioSource" ,
1315       form
1316         block {
1317           separator "\n" ,
1318           components {
1319             {
1320               asn1 "BioSource.genome" ,
1321               form
1322                 enum {
1323                    } } ,
1324             {
1325               asn1 "BioSource.org" ,
1326               label "Organism" ,
1327               form
1328                 use-template "StdOrgRef" } } } } } ,
1329   {
1330     name "StdCdRegion" ,
1331     format {
1332       asn1 "Cdregion" ,
1333       label "Cdregion" ,
1334       form
1335         block {
1336           separator "\n" ,
1337           components {
1338             {
1339               asn1 "Cdregion.orf" ,
1340               form
1341                 boolean {
1342                   true "Uncharacterized Open Reading Frame" } } ,
1343             {
1344               asn1 "Cdregion.frame" ,
1345               label "Reading Frame = " ,
1346               form
1347                 enum {
1348                    } } ,
1349             {
1350               asn1 "Cdregion.code" ,
1351               label "Genetic Code: " ,
1352               suffix ";" ,
1353               form
1354                 block {
1355                   separator ", " ,
1356                   components {
1357                     {
1358                       asn1 "Genetic-code.E.name" ,
1359                       form
1360                         text {
1361                            } } ,
1362                     {
1363                       asn1 "Genetic-code.E.id" ,
1364                       label "id= " ,
1365                       form
1366                         text {
1367                            } } } } } ,
1368             {
1369               asn1 "Cdregion.conflict" ,
1370               form
1371                 boolean {
1372                   true "Translation conflicts with protein sequence" } } ,
1373             {
1374               asn1 "Cdregion.stops" ,
1375               prefix "Translation contains " ,
1376               suffix " stop codons" ,
1377               form
1378                 text {
1379                    } } ,
1380             {
1381               asn1 "Cdregion.gaps" ,
1382               prefix "Translation contains " ,
1383               suffix " gaps when aligned to protein" ,
1384               form
1385                 text {
1386                    } } ,
1387             {
1388               asn1 "Cdregion.mismatch" ,
1389               prefix "Translation contains " ,
1390               suffix " mismatches when aligned to protein" ,
1391               form
1392                 text {
1393                    } } } } } } ,
1394   {
1395     name "StdProtRef" ,
1396     format {
1397       asn1 "Prot-ref" ,
1398       label "Prot-ref" ,
1399       form
1400         block {
1401           separator "\n" ,
1402           components {
1403             {
1404               asn1 "Prot-ref.name" ,
1405               form
1406                 block {
1407                   separator ", " ,
1408                   components {
1409                     {
1410                       asn1 "Prot-ref.name.E" ,
1411                       form
1412                         text {
1413                            } } } } } ,
1414             {
1415               asn1 "Prot-ref.desc" ,
1416               prefix "[" ,
1417               suffix "]" ,
1418               form
1419                 text {
1420                    } } ,
1421             {
1422               asn1 "Prot-ref.processed" ,
1423               form
1424                 enum {
1425                    } } ,
1426             {
1427               asn1 "Prot-ref.ec" ,
1428               label "ec" ,
1429               prefix ": " ,
1430               form
1431                 block {
1432                   separator ", " ,
1433                   components {
1434                     {
1435                       asn1 "Prot-ref.ec.E" ,
1436                       form
1437                         text {
1438                            } } } } } ,
1439             {
1440               asn1 "Prot-ref.activity" ,
1441               label "activity" ,
1442               prefix ": " ,
1443               form
1444                 block {
1445                   separator ", " ,
1446                   components {
1447                     {
1448                       asn1 "Prot-ref.activity.E" ,
1449                       form
1450                         text {
1451                            } } } } } ,
1452             {
1453               asn1 "Prot-ref.db" ,
1454               label "Cross Reference" ,
1455               prefix " " ,
1456               form
1457                 block {
1458                   separator ", " ,
1459                   components {
1460                     {
1461                       asn1 "Prot-ref.db.E" ,
1462                       prefix "(" ,
1463                       suffix ")" ,
1464                       form
1465                         use-template "StdDbtag" } } } } } } } } ,
1466   {
1467     name "StdRNARef" ,
1468     format {
1469       asn1 "RNA-ref" ,
1470       label "RNA-ref" ,
1471       form
1472         block {
1473           separator "\n" ,
1474           components {
1475             {
1476               asn1 "RNA-ref.type" ,
1477               form
1478                 enum {
1479                    } } ,
1480             {
1481               asn1 "RNA-ref.pseudo" ,
1482               form
1483                 boolean {
1484                   true "This is an RNA pseudogene." } } ,
1485             {
1486               asn1 "RNA-ref.ext.name" ,
1487               form
1488                 text {
1489                    } } } } } } ,
1490   {
1491     name "StdPubdesc" ,
1492     format {
1493       asn1 "Pubdesc" ,
1494       label "Pubdesc" ,
1495       form
1496         block {
1497           separator "\n" ,
1498           components {
1499             {
1500               asn1 "Pubdesc.pub" ,
1501               form
1502                 use-template "StdPubEquiv" } ,
1503             {
1504               asn1 "Pubdesc" ,
1505               prefix "In this article:\n" ,
1506               form
1507                 block {
1508                   separator "\n" ,
1509                   components {
1510                     {
1511                       asn1 "Pubdesc.name" ,
1512                       label "name=" ,
1513                       form
1514                         text {
1515                            } } ,
1516                     {
1517                       asn1 "Pubdesc.fig" ,
1518                       label "figure=" ,
1519                       form
1520                         text {
1521                            } } ,
1522                     {
1523                       asn1 "Pubdesc.poly-a" ,
1524                       form
1525                         boolean {
1526                           true "poly(A) shown" } } ,
1527                     {
1528                       asn1 "Pubdesc.maploc" ,
1529                       label "map location=" ,
1530                       form
1531                         text {
1532                            } } ,
1533                     {
1534                       asn1 "Pubdesc.num" ,
1535                       form
1536                         use-template "StdNumbering" } ,
1537                     {
1538                       asn1 "Pubdesc.numexc" ,
1539                       form
1540                         boolean {
1541                           true "numbering inconsistent" } } } } } ,
1542             {
1543               asn1 "Pubdesc.comment" ,
1544               form
1545                 text {
1546                    } } } } } } ,
1547   {
1548     name "StdImpFeat" ,
1549     format {
1550       asn1 "Imp-feat.key" ,
1551       label "Imp-feat" ,
1552       form
1553         text {
1554            } } } ,
1555   {
1556     name "StdRsiteRef" ,
1557     format {
1558       asn1 "Rsite-ref" ,
1559       label "Rsite-ref" ,
1560       form
1561         block {
1562           components {
1563             {
1564               asn1 "Rsite-ref.str" ,
1565               form
1566                 text {
1567                    } } ,
1568             {
1569               asn1 "Rsite-ref.std" ,
1570               form
1571                 use-template "StdDbtag" } } } } } ,
1572   {
1573     name "StdTxInit" ,
1574     format {
1575       asn1 "Txinit" ,
1576       label "TxInit" ,
1577       form
1578         block {
1579           components {
1580             {
1581               asn1 "Txinit.name" ,
1582               form
1583                 text {
1584                    } } } } } } ,
1585   {
1586     name "StdNumbering" ,
1587     format {
1588       asn1 "Numbering" ,
1589       label "Numbering" ,
1590       form
1591         null NULL } } ,
1592   {
1593     name "StdGBBlock" ,
1594     format {
1595       asn1 "GB-block" ,
1596       label "GenBank-block" ,
1597       form
1598         block {
1599           separator "\n" ,
1600           components {
1601             {
1602               asn1 "GB-block.extra-accessions" ,
1603               label "Extra accessions" ,
1604               prefix " (" ,
1605               suffix ")" ,
1606               form
1607                 block {
1608                   separator ", " ,
1609                   components {
1610                     {
1611                       asn1 "GB-block.extra-accessions.E" ,
1612                       form
1613                         text {
1614                            } } } } } ,
1615             {
1616               asn1 "GB-block.keywords" ,
1617               label "Keywords" ,
1618               prefix " (" ,
1619               suffix ")" ,
1620               form
1621                 block {
1622                   separator ", " ,
1623                   components {
1624                     {
1625                       asn1 "GB-block.keywords.E" ,
1626                       form
1627                         text {
1628                            } } } } } ,
1629             {
1630               asn1 "GB-block.source" ,
1631               label "Source: " ,
1632               form
1633                 text {
1634                    } } ,
1635             {
1636               asn1 "GB-block.origin" ,
1637               label "Origin: " ,
1638               form
1639                 text {
1640                    } } ,
1641             {
1642               asn1 "GB-block.div" ,
1643               label "Division: " ,
1644               form
1645                 text {
1646                    } } ,
1647             {
1648               asn1 "GB-block.taxonomy" ,
1649               label "Taxonomy: " ,
1650               form
1651                 text {
1652                    } } ,
1653             {
1654               asn1 "GB-block.date" ,
1655               label "Date: " ,
1656               form
1657                 text {
1658                    } } ,
1659             {
1660               asn1 "GB-block.entry-date" ,
1661               label "Entry date: " ,
1662               form
1663                 user {
1664                   printfunc "StdDatePrint" } } } } } } ,
1665   {
1666     name "StdFeatId" ,
1667     format {
1668       asn1 "Feat-id" ,
1669       form
1670         block {
1671           components {
1672             {
1673               asn1 "Feat-id.gibb" ,
1674               label "GenInfo Backbone: " ,
1675               form
1676                 text {
1677                    } } ,
1678             {
1679               asn1 "Feat-id.giim.id" ,
1680               label "GenInfo Import Id: " ,
1681               form
1682                 text {
1683                    } } ,
1684             {
1685               asn1 "Feat-id.local" ,
1686               label "Local: " ,
1687               form
1688                 use-template "StdObjectId" } ,
1689             {
1690               asn1 "Feat-id.general" ,
1691               form
1692                 use-template "StdDbtag" } } } } } ,
1693   {
1694     name "StdSeqFeatCommon" ,
1695     format {
1696       asn1 "Seq-feat" ,
1697       form
1698         block {
1699           separator "\n" ,
1700           components {
1701             {
1702               asn1 "Seq-feat.id" ,
1703               label "Id=" ,
1704               form
1705                 use-template "StdFeatId" } ,
1706             {
1707               asn1 "Seq-feat.title" ,
1708               form
1709                 text {
1710                    } } ,
1711             {
1712               asn1 "Seq-feat" ,
1713               suffix ";" ,
1714               form
1715                 block {
1716                   separator ", " ,
1717                   components {
1718                     {
1719                       asn1 "Seq-feat.partial" ,
1720                       form
1721                         boolean {
1722                           true "Partial" } } ,
1723                     {
1724                       asn1 "Seq-feat.except" ,
1725                       form
1726                         boolean {
1727                           true "Biological Exception" } } ,
1728                     {
1729                       asn1 "Seq-feat.exp-ev" ,
1730                       label "Evidence" ,
1731                       prefix " is " ,
1732                       form
1733                         enum {
1734                            } } } } } ,
1735             {
1736               asn1 "Seq-feat.comment" ,
1737               form
1738                 text {
1739                    } } ,
1740             {
1741               asn1 "Seq-feat.ext" ,
1742               form
1743                 use-template "StdUserObj" } ,
1744             {
1745               asn1 "Seq-feat.qual" ,
1746               label "Qualifiers" ,
1747               prefix "\n" ,
1748               form
1749                 block {
1750                   separator "\n" ,
1751                   components {
1752                     {
1753                       asn1 "Seq-feat.qual.E" ,
1754                       prefix "/" ,
1755                       form
1756                         block {
1757                           separator "= " ,
1758                           components {
1759                             {
1760                               asn1 "Gb-qual.qual" ,
1761                               form
1762                                 text {
1763                                    } } ,
1764                             {
1765                               asn1 "Gb-qual.val" ,
1766                               form
1767                                 text {
1768                                    } } } } } } } } } } } } ,
1769   {
1770     name "StdDbtag" ,
1771     format {
1772       asn1 "Dbtag" ,
1773       form
1774         block {
1775           components {
1776             {
1777               asn1 "Dbtag.db" ,
1778               suffix ": " ,
1779               form
1780                 text {
1781                    } } ,
1782             {
1783               asn1 "Dbtag.tag" ,
1784               form
1785                 use-template "StdObjectId" } } } } } ,
1786   {
1787     name "StdObjectId" ,
1788     format {
1789       asn1 "Object-id" ,
1790       form
1791         block {
1792           components {
1793             {
1794               asn1 "Object-id.id" ,
1795               form
1796                 text {
1797                    } } ,
1798             {
1799               asn1 "Object-id.str" ,
1800               form
1801                 text {
1802                    } } } } } } }