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+<HEAD>
+<TITLE> New Step 1 Commands</TITLE>
+</HEAD>
+<BODY><P>
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+<HR> <P>
+<H2><A NAME=SECTION00010100000000000000> New Step 1 Commands</A></H2>
+<P>
+SCREENSIZE 120
+<P>
+Usually you should not need to change this value, it alters the
+screening used by the printer. A value of 120 is used by default. On
+most 300dpi black and white printers this gives much smoother greys
+than the default used in earlier versions of ALSCRIPT.
+<P>
+PIR_SAVE filename
+<P>
+Will cause the block file to be saved into the file ``filename'' in
+PIR format. This can be useful for moving block file alignments to other
+programs.
+<P>
+MSF_SAVE filename
+<P>
+Will cause the block file to be saved into the file ``filename'' in
+something that approximates GCG .msf format. <em>Warning! This has not
+been fully tested.</em>
+<P>
+NUMBER_COLOUR 4
+<P>
+Sets the colour used for numbering at the top of the alignment (no
+American spelling at the moment). In this example, colour number 4 has been
+defined (See the DEFINE_COLOURcommand if you are not sure what this means).
+<P>
+SINGLE_PAGEIf this is set, ALSCRIPT assumes everything will be plotted on one
+page. At the moment, all this does is write the bounding box for the
+figure, so encapsulating the PostScript. This <em>may</em> allow the
+output of alscript to be imported into word processors etc, but
+probably not all.
+<P>
+ID_ONLY_ON_FIRST_LINEIf this is present, then sequence identifiers will only be printed on
+the first line of the alignment. Often this looks better for small
+alignments than the default.
+<P>
+BACKGROUND_COLOUR 7
+<P>
+Sets the colour used for the background to the alignment. This can be
+useful for preparing figures for projection. At the moment this only
+works reliably when the SINGLE_PAGEis also set.
+<P>
+BOUNDING_BOX x y x1 y1
+<P>
+Defines the bounding box for the figure. This is set in points (1/72 inch).
+NOTE: In version 2.0 this was a STEP 2 Command.
+<P>
+BACKGROUND_REGION x y x1 y1
+<P>
+Defines the region to colour as background - the default is set up for A4 paper
+so US users may have to fiddle with this. Values are points (1/72 inch).
+NOTE: In version 2.0 this was a STEP 2 Command.
+<P>
+<HR> <A NAME=tex2html202 HREF=subsection3_10_2.html><IMG ALIGN=MIDDLE SRC="http://geoff.biop.ox.ac.uk/latex2html/next_motif.gif"></A> <A NAME=tex2html200 HREF=section3_10.html><IMG ALIGN=MIDDLE SRC="http://geoff.biop.ox.ac.uk/latex2html/up_motif.gif"></A> <A NAME=tex2html194 HREF=section3_10.html><IMG ALIGN=MIDDLE SRC="http://geoff.biop.ox.ac.uk/latex2html/previous_motif.gif"></A> <A NAME=tex2html204 HREF=tableofcontents3_1.html><IMG ALIGN=MIDDLE SRC="http://geoff.biop.ox.ac.uk/latex2html/contents_motif.gif"></A> <BR>
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+<HR>
+
+</BODY>
+<P><ADDRESS>
+gjb@bioch.ox.ac.uk
+</ADDRESS>
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