JPRED-2 Add sources of all binaries (except alscript) to Git

[jpred.git] / sources / multicoil / data64.log

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+
+Input file is murine.seq
+
+Scores by MultiCoil.
+The probability cutoff for the coiled-coil locater is 0.50.
+The scoring distances are: 
+        For dimeric table: 2 3 4 
+        For trimeric table: 1 2 3 
+
+
+1      P1;J02255_3, 
+       Moloney murine leukemia virus, complete genome. env polyprotein,
+  Maximum coiled-coil residue probability: 0.988 in position 538.
+  Maximum dimeric residue probability:     0.059 in position 503.
+  Maximum trimeric residue probability:    0.967 in position 531.
+
+
+Res    1 0123456789012345678901234567890123456789012345678901234567890123456789
+Sequence MARSTLSKPLKNKVNPRGPLIPLILLMLRGVSTASPGSSPHQVYNITWEVTNGDRETVWATSGNHPLWTW
+Dimer    ......................................................................
+Trimer   ......................................................................
+Coil     ......................................................................
+
+Res   71 0123456789012345678901234567890123456789012345678901234567890123456789
+Sequence WPDLTPDLCMLAHHGPSYWGLEYQSPFSSPPGPPCCSGGSSPGCSRDCEEPLTSLTPRCNTAWNRLKLDQ
+Dimer    ......................................................................
+Trimer   ......................................................................
+Coil     ......................................................................
+
+Res  141 0123456789012345678901234567890123456789012345678901234567890123456789
+Sequence TTHKSNEGFYVCPGPHRPRESKSCGGPDSFYCAYWGCETTGRAYWKPSSSWDFITVNNNLTSDQAVQVCK
+Dimer    ......................................................................
+Trimer   ......................................................................
+Coil     ......................................................................
+
+Res  211 0123456789012345678901234567890123456789012345678901234567890123456789
+Sequence DNKWCNPLVIRFTDAGRRVTSWTTGHYWGLRLYVSGQDPGLTFGIRLRYQNLGPRVPIGPNPVLADQQPL
+Dimer    ......................................................................
+Trimer   ......................................................................
+Coil     ......................................................................
+
+Res  281 0123456789012345678901234567890123456789012345678901234567890123456789
+Sequence SKPKPVKSPSVTKPPSGTPLSPTQLPPAGTENRLLNLVDGAYQALNLTSPDKTQECWLCLVAGPPYYEGV
+Dimer    ......................................................................
+Trimer   ......................................................................
+Coil     ......................................................................
+
+Res  351 0123456789012345678901234567890123456789012345678901234567890123456789
+Sequence AVLGTYSNHTSAPANCSVASQHKLTLSEVTGQGLCIGAVPKTHQALCNTTQTSSRGSYYLVAPTGTMWAC
+Dimer    ......................................................................
+Trimer   ......................................................................
+Coil     ......................................................................
+
+Res  421 0123456789012345678901234567890123456789012345678901234567890123456789
+Sequence STGLTPCISTTILNLTTDYCVLVELWPRVTYHSPSYVYGLFERSNRHKREPVSLTLALLLGGLTMGGIAA
+Dimer    ......................................................................
+Trimer   ......................................................................
+Coil     ......................................................................
+
+Res  491 0123456789012345678901234567890123456789012345678901234567890123456789
+Sequence GIGTGTTALMATQQFQQLQAAVQDDLREVEKSISNLEKSLTSLSEVVLQNRRGLDLLFLKEGGLCAALKE
+Dimer    ......................................................................
+Trimer   ..........gabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcd.............
+Coil     ..........gabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcd.............
+
+Res  561 0123456789012345678901234567890123456789012345678901234567890123456789
+Sequence ECCFYADHTGLVRDSMAKLRERLNQRQKLFESTQGWFEGLFNRSPWFTTLISTIMGPLIVLLMILLFGPC
+Dimer    ......................................................................
+Trimer   ......................................................................
+Coil     ......................................................................
+
+Res  631 01234567890123456789012345678901234
+Sequence ILNRLVQFVKDRISVVQALVLTQQYHQLKPIEYEP
+Dimer    ...................................
+Trimer   ...................................
+Coil     ...................................
+
+
+Trim    0.93@ 501- 547:g,3
+Coil    0.96@ 501- 547:g,3
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