datadb/compbio/cassandra/DataBase.java

   1 package compbio.cassandra;
   2
   3 import java.util.List;
   4 import java.util.ArrayList;
   5 import java.util.Collections;
   6
   7 public class DataBase {
   8         private String date;
   9         private int total;                                      // total number of jobs
  10         private int totalOK;                            // number of jobs with execution status OK
  11         private int totalStopped;                        // number of jobs with execution status STOPPED
  12         private int totalError;                         // number of jobs with execution status Jpred ERROR
  13         private int totalTimeOut;                       // number of jobs with execution status TIMEOUT
  14         private int totalJobs;
  15         private int totalId;                            // total jobs for current protein sequence
  16         private String id;
  17         private String ip;
  18         private String prot;                            // protein sequence
  19         private String jpred;
  20         private List<String> subProt;           // protein sequence divided by several parts for highlighting the particular part
  21         private List<Integer> timeRez;
  22         private List<Integer> timeTotalExec;
  23         private StructureJobLog logInfo;
  24         private AnnotatedProteinSequenceBean predictions;
  25
  26         public DataBase() {
  27         }
  28
  29         public DataBase(String dat, int total) {
  30                 this.date = dat;
  31                 this.total = total;
  32         }
  33
  34         public void setDate(String dat) {
  35                 this.date = dat;
  36         }
  37
  38         public String getDate() {
  39                 if (null == date)
  40                         return "1/1/1970";
  41                 return date;
  42         }
  43
  44         public void setTotal(int tot) {
  45                 this.total = tot;
  46         }
  47
  48         public int getTotal() {
  49                 return total;
  50         }
  51
  52         public void setTotalOK(int tot) {
  53                 this.totalOK = tot;
  54         }
  55
  56         public int getTotalOK() {
  57                 return totalOK;
  58         }
  59
  60         public void setTotalStopped(int tot) {
  61                 this.totalStopped = tot;
  62         }
  63
  64         public int getTotalStopped() {
  65                 return totalStopped;
  66         }
  67
  68         public void setTotalError(int tot) {
  69                 this.totalError = tot;
  70         }
  71
  72         public int getTotalError() {
  73                 return totalError;
  74         }
  75
  76         public void setTotalTimeOut(int tot) {
  77                 this.totalTimeOut = tot;
  78         }
  79
  80         public int getTotalTimeOut() {
  81                 return totalTimeOut;
  82         }
  83
  84         public void setTotalJobs(int totalJobs) {
  85                 this.totalJobs = totalJobs;
  86         }
  87
  88         public int getTotalJobs() {
  89                 return totalJobs;
  90         }
  91
  92         public void setTotalId(int totId) {
  93                 this.totalId = totId;
  94         }
  95
  96         public int getTotalId() {
  97                 return totalId;
  98         }
  99
 100         public void setProt(String prot) {
 101                 this.prot = prot;
 102         }
 103
 104         public String getProt() {
 105                 return prot;
 106         }
 107
 108         public void setJpred(String jpred) {
 109                 this.jpred = jpred;
 110         }
 111
 112         public String getJpred() {
 113                 return jpred;
 114         }
 115
 116         public void setId(String id) {
 117                 this.id = id;
 118         }
 119
 120         public String getId() {
 121                 return id;
 122         }
 123
 124         public void setIp(String ip) {
 125                 this.ip = ip;
 126         }
 127
 128         public String getIp() {
 129                 return ip;
 130         }
 131
 132         public void setSubProt(List<String> subProt) {
 133                 this.subProt = subProt;
 134         }
 135
 136         public List<String> getSubProt() {
 137                 return subProt;
 138         }
 139
 140         public void setTimeRez(List<Integer> timeRez) {
 141                 this.timeRez = timeRez;
 142         }
 143
 144         public List<Integer> getTimeRez() {
 145                 return timeRez;
 146         }
 147
 148         public void setTimeTotalExec(List<Integer> timeTotalExec) {
 149                 this.timeTotalExec = timeTotalExec;
 150         }
 151
 152         public List<Integer> getTimeTotalExec() {
 153                 return timeTotalExec;
 154         }
 155
 156         public void setLogInfo(StructureJobLog logInfo){
 157                 this.logInfo = logInfo;
 158         }
 159
 160         public StructureJobLog getLogInfo() {
 161                 return logInfo;
 162         }
 163
 164         public void setPredictions(AnnotatedProteinSequenceBean predictions){
 165                 this.predictions = predictions;
 166         }
 167
 168         public AnnotatedProteinSequenceBean getPredictions() {
 169                 return predictions;
 170         }
 171
 172 }