src/uk/ac/vamsas/objects/core/descriptors/AlignmentSequenceDescriptor.java

   1 /*\r
   2  * This class was automatically generated with \r
   3  * <a href="http://www.castor.org">Castor 1.1</a>, using an XML\r
   4  * Schema.\r
   5  * $Id$\r
   6  */\r
   7 \r
   8 package uk.ac.vamsas.objects.core.descriptors;\r
   9 \r
  10   //---------------------------------/\r
  11  //- Imported classes and packages -/\r
  12 //---------------------------------/\r
  13 \r
  14 import uk.ac.vamsas.objects.core.AlignmentSequence;\r
  15 \r
  16 /**\r
  17  * Class AlignmentSequenceDescriptor.\r
  18  * \r
  19  * @version $Revision$ $Date$\r
  20  */\r
  21 public class AlignmentSequenceDescriptor extends uk.ac.vamsas.objects.core.descriptors.SequenceTypeDescriptor {\r
  22 \r
  23 \r
  24       //--------------------------/\r
  25      //- Class/Member Variables -/\r
  26     //--------------------------/\r
  27 \r
  28     /**\r
  29      * Field _elementDefinition.\r
  30      */\r
  31     private boolean _elementDefinition;\r
  32 \r
  33     /**\r
  34      * Field _nsPrefix.\r
  35      */\r
  36     private java.lang.String _nsPrefix;\r
  37 \r
  38     /**\r
  39      * Field _nsURI.\r
  40      */\r
  41     private java.lang.String _nsURI;\r
  42 \r
  43     /**\r
  44      * Field _xmlName.\r
  45      */\r
  46     private java.lang.String _xmlName;\r
  47 \r
  48     /**\r
  49      * Field _identity.\r
  50      */\r
  51     private org.exolab.castor.xml.XMLFieldDescriptor _identity;\r
  52 \r
  53 \r
  54       //----------------/\r
  55      //- Constructors -/\r
  56     //----------------/\r
  57 \r
  58     public AlignmentSequenceDescriptor() {\r
  59         super();\r
  60         setExtendsWithoutFlatten(new uk.ac.vamsas.objects.core.descriptors.SequenceTypeDescriptor());\r
  61         _nsURI = "http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes";\r
  62         _xmlName = "alignmentSequence";\r
  63         _elementDefinition = true;\r
  64         \r
  65         //-- set grouping compositor\r
  66         setCompositorAsSequence();\r
  67         org.exolab.castor.xml.util.XMLFieldDescriptorImpl  desc           = null;\r
  68         org.exolab.castor.mapping.FieldHandler             handler        = null;\r
  69         org.exolab.castor.xml.FieldValidator               fieldValidator = null;\r
  70         //-- initialize attribute descriptors\r
  71         \r
  72         //-- _id\r
  73         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_id", "id", org.exolab.castor.xml.NodeType.Attribute);\r
  74         this._identity = desc;\r
  75         handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
  76             public java.lang.Object getValue( java.lang.Object object ) \r
  77                 throws IllegalStateException\r
  78             {\r
  79                 AlignmentSequence target = (AlignmentSequence) object;\r
  80                 return target.getId();\r
  81             }\r
  82             public void setValue( java.lang.Object object, java.lang.Object value) \r
  83                 throws IllegalStateException, IllegalArgumentException\r
  84             {\r
  85                 try {\r
  86                     AlignmentSequence target = (AlignmentSequence) object;\r
  87                     target.setId( (java.lang.String) value);\r
  88                 } catch (java.lang.Exception ex) {\r
  89                     throw new IllegalStateException(ex.toString());\r
  90                 }\r
  91             }\r
  92             public java.lang.Object newInstance(java.lang.Object parent) {\r
  93                 return new java.lang.String();\r
  94             }\r
  95         };\r
  96         desc.setHandler(handler);\r
  97         desc.setMultivalued(false);\r
  98         addFieldDescriptor(desc);\r
  99         \r
 100         //-- validation code for: _id\r
 101         fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
 102         { //-- local scope\r
 103             org.exolab.castor.xml.validators.IdValidator typeValidator;\r
 104             typeValidator = new org.exolab.castor.xml.validators.IdValidator();\r
 105             fieldValidator.setValidator(typeValidator);\r
 106         }\r
 107         desc.setValidator(fieldValidator);\r
 108         //-- _refid\r
 109         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Object.class, "_refid", "refid", org.exolab.castor.xml.NodeType.Attribute);\r
 110         desc.setReference(true);\r
 111         handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
 112             public java.lang.Object getValue( java.lang.Object object ) \r
 113                 throws IllegalStateException\r
 114             {\r
 115                 AlignmentSequence target = (AlignmentSequence) object;\r
 116                 return target.getRefid();\r
 117             }\r
 118             public void setValue( java.lang.Object object, java.lang.Object value) \r
 119                 throws IllegalStateException, IllegalArgumentException\r
 120             {\r
 121                 try {\r
 122                     AlignmentSequence target = (AlignmentSequence) object;\r
 123                     target.setRefid( (java.lang.Object) value);\r
 124                 } catch (java.lang.Exception ex) {\r
 125                     throw new IllegalStateException(ex.toString());\r
 126                 }\r
 127             }\r
 128             public java.lang.Object newInstance(java.lang.Object parent) {\r
 129                 return new java.lang.Object();\r
 130             }\r
 131         };\r
 132         desc.setHandler(handler);\r
 133         desc.setRequired(true);\r
 134         desc.setMultivalued(false);\r
 135         addFieldDescriptor(desc);\r
 136         \r
 137         //-- validation code for: _refid\r
 138         fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
 139         fieldValidator.setMinOccurs(1);\r
 140         { //-- local scope\r
 141             org.exolab.castor.xml.validators.IdRefValidator typeValidator;\r
 142             typeValidator = new org.exolab.castor.xml.validators.IdRefValidator();\r
 143             fieldValidator.setValidator(typeValidator);\r
 144         }\r
 145         desc.setValidator(fieldValidator);\r
 146         //-- initialize element descriptors\r
 147         \r
 148         //-- _alignmentSequenceAnnotationList\r
 149         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(uk.ac.vamsas.objects.core.AlignmentSequenceAnnotation.class, "_alignmentSequenceAnnotationList", "AlignmentSequenceAnnotation", org.exolab.castor.xml.NodeType.Element);\r
 150         handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
 151             public java.lang.Object getValue( java.lang.Object object ) \r
 152                 throws IllegalStateException\r
 153             {\r
 154                 AlignmentSequence target = (AlignmentSequence) object;\r
 155                 return target.getAlignmentSequenceAnnotation();\r
 156             }\r
 157             public void setValue( java.lang.Object object, java.lang.Object value) \r
 158                 throws IllegalStateException, IllegalArgumentException\r
 159             {\r
 160                 try {\r
 161                     AlignmentSequence target = (AlignmentSequence) object;\r
 162                     target.addAlignmentSequenceAnnotation( (uk.ac.vamsas.objects.core.AlignmentSequenceAnnotation) value);\r
 163                 } catch (java.lang.Exception ex) {\r
 164                     throw new IllegalStateException(ex.toString());\r
 165                 }\r
 166             }\r
 167             public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {\r
 168                 try {\r
 169                     AlignmentSequence target = (AlignmentSequence) object;\r
 170                     target.removeAllAlignmentSequenceAnnotation();\r
 171                 } catch (java.lang.Exception ex) {\r
 172                     throw new IllegalStateException(ex.toString());\r
 173                 }\r
 174             }\r
 175             public java.lang.Object newInstance(java.lang.Object parent) {\r
 176                 return new uk.ac.vamsas.objects.core.AlignmentSequenceAnnotation();\r
 177             }\r
 178         };\r
 179         desc.setHandler(handler);\r
 180         desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");\r
 181         desc.setMultivalued(true);\r
 182         addFieldDescriptor(desc);\r
 183         \r
 184         //-- validation code for: _alignmentSequenceAnnotationList\r
 185         fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
 186         fieldValidator.setMinOccurs(0);\r
 187         { //-- local scope\r
 188         }\r
 189         desc.setValidator(fieldValidator);\r
 190     }\r
 191 \r
 192 \r
 193       //-----------/\r
 194      //- Methods -/\r
 195     //-----------/\r
 196 \r
 197     /**\r
 198      * Method getAccessMode.\r
 199      * \r
 200      * @return the access mode specified for this class.\r
 201      */\r
 202     public org.exolab.castor.mapping.AccessMode getAccessMode(\r
 203     ) {\r
 204         return null;\r
 205     }\r
 206 \r
 207     /**\r
 208      * Method getIdentity.\r
 209      * \r
 210      * @return the identity field, null if this class has no\r
 211      * identity.\r
 212      */\r
 213     public org.exolab.castor.mapping.FieldDescriptor getIdentity(\r
 214     ) {\r
 215         if (_identity == null) {\r
 216             return super.getIdentity();\r
 217         }\r
 218         return _identity;\r
 219     }\r
 220 \r
 221     /**\r
 222      * Method getJavaClass.\r
 223      * \r
 224      * @return the Java class represented by this descriptor.\r
 225      */\r
 226     public java.lang.Class getJavaClass(\r
 227     ) {\r
 228         return uk.ac.vamsas.objects.core.AlignmentSequence.class;\r
 229     }\r
 230 \r
 231     /**\r
 232      * Method getNameSpacePrefix.\r
 233      * \r
 234      * @return the namespace prefix to use when marshaling as XML.\r
 235      */\r
 236     public java.lang.String getNameSpacePrefix(\r
 237     ) {\r
 238         return _nsPrefix;\r
 239     }\r
 240 \r
 241     /**\r
 242      * Method getNameSpaceURI.\r
 243      * \r
 244      * @return the namespace URI used when marshaling and\r
 245      * unmarshaling as XML.\r
 246      */\r
 247     public java.lang.String getNameSpaceURI(\r
 248     ) {\r
 249         return _nsURI;\r
 250     }\r
 251 \r
 252     /**\r
 253      * Method getValidator.\r
 254      * \r
 255      * @return a specific validator for the class described by this\r
 256      * ClassDescriptor.\r
 257      */\r
 258     public org.exolab.castor.xml.TypeValidator getValidator(\r
 259     ) {\r
 260         return this;\r
 261     }\r
 262 \r
 263     /**\r
 264      * Method getXMLName.\r
 265      * \r
 266      * @return the XML Name for the Class being described.\r
 267      */\r
 268     public java.lang.String getXMLName(\r
 269     ) {\r
 270         return _xmlName;\r
 271     }\r
 272 \r
 273     /**\r
 274      * Method isElementDefinition.\r
 275      * \r
 276      * @return true if XML schema definition of this Class is that\r
 277      * of a global\r
 278      * element or element with anonymous type definition.\r
 279      */\r
 280     public boolean isElementDefinition(\r
 281     ) {\r
 282         return _elementDefinition;\r
 283     }\r
 284 \r
 285 }\r