src/uk/ac/vamsas/objects/core/descriptors/DataSetDescriptor.java

   1 /*\r
   2  * This class was automatically generated with \r
   3  * <a href="http://www.castor.org">Castor 1.1</a>, using an XML\r
   4  * Schema.\r
   5  * $Id$\r
   6  */\r
   7 \r
   8 package uk.ac.vamsas.objects.core.descriptors;\r
   9 \r
  10   //---------------------------------/\r
  11  //- Imported classes and packages -/\r
  12 //---------------------------------/\r
  13 \r
  14 import uk.ac.vamsas.objects.core.DataSet;\r
  15 \r
  16 /**\r
  17  * Class DataSetDescriptor.\r
  18  * \r
  19  * @version $Revision$ $Date$\r
  20  */\r
  21 public class DataSetDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {\r
  22 \r
  23 \r
  24       //--------------------------/\r
  25      //- Class/Member Variables -/\r
  26     //--------------------------/\r
  27 \r
  28     /**\r
  29      * Field _elementDefinition.\r
  30      */\r
  31     private boolean _elementDefinition;\r
  32 \r
  33     /**\r
  34      * Field _nsPrefix.\r
  35      */\r
  36     private java.lang.String _nsPrefix;\r
  37 \r
  38     /**\r
  39      * Field _nsURI.\r
  40      */\r
  41     private java.lang.String _nsURI;\r
  42 \r
  43     /**\r
  44      * Field _xmlName.\r
  45      */\r
  46     private java.lang.String _xmlName;\r
  47 \r
  48 \r
  49       //----------------/\r
  50      //- Constructors -/\r
  51     //----------------/\r
  52 \r
  53     public DataSetDescriptor() {\r
  54         super();\r
  55         _nsURI = "http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes";\r
  56         _xmlName = "DataSet";\r
  57         _elementDefinition = true;\r
  58         \r
  59         //-- set grouping compositor\r
  60         setCompositorAsSequence();\r
  61         org.exolab.castor.xml.util.XMLFieldDescriptorImpl  desc           = null;\r
  62         org.exolab.castor.mapping.FieldHandler             handler        = null;\r
  63         org.exolab.castor.xml.FieldValidator               fieldValidator = null;\r
  64         //-- initialize attribute descriptors\r
  65         \r
  66         //-- _id\r
  67         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_id", "id", org.exolab.castor.xml.NodeType.Attribute);\r
  68         super.setIdentity(desc);\r
  69         handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
  70             public java.lang.Object getValue( java.lang.Object object ) \r
  71                 throws IllegalStateException\r
  72             {\r
  73                 DataSet target = (DataSet) object;\r
  74                 return target.getId();\r
  75             }\r
  76             public void setValue( java.lang.Object object, java.lang.Object value) \r
  77                 throws IllegalStateException, IllegalArgumentException\r
  78             {\r
  79                 try {\r
  80                     DataSet target = (DataSet) object;\r
  81                     target.setId( (java.lang.String) value);\r
  82                 } catch (java.lang.Exception ex) {\r
  83                     throw new IllegalStateException(ex.toString());\r
  84                 }\r
  85             }\r
  86             public java.lang.Object newInstance(java.lang.Object parent) {\r
  87                 return new java.lang.String();\r
  88             }\r
  89         };\r
  90         desc.setHandler(handler);\r
  91         desc.setMultivalued(false);\r
  92         addFieldDescriptor(desc);\r
  93         \r
  94         //-- validation code for: _id\r
  95         fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
  96         { //-- local scope\r
  97             org.exolab.castor.xml.validators.IdValidator typeValidator;\r
  98             typeValidator = new org.exolab.castor.xml.validators.IdValidator();\r
  99             fieldValidator.setValidator(typeValidator);\r
 100         }\r
 101         desc.setValidator(fieldValidator);\r
 102         //-- initialize element descriptors\r
 103         \r
 104         //-- _sequenceList\r
 105         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(uk.ac.vamsas.objects.core.Sequence.class, "_sequenceList", "Sequence", org.exolab.castor.xml.NodeType.Element);\r
 106         handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
 107             public java.lang.Object getValue( java.lang.Object object ) \r
 108                 throws IllegalStateException\r
 109             {\r
 110                 DataSet target = (DataSet) object;\r
 111                 return target.getSequence();\r
 112             }\r
 113             public void setValue( java.lang.Object object, java.lang.Object value) \r
 114                 throws IllegalStateException, IllegalArgumentException\r
 115             {\r
 116                 try {\r
 117                     DataSet target = (DataSet) object;\r
 118                     target.addSequence( (uk.ac.vamsas.objects.core.Sequence) value);\r
 119                 } catch (java.lang.Exception ex) {\r
 120                     throw new IllegalStateException(ex.toString());\r
 121                 }\r
 122             }\r
 123             public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {\r
 124                 try {\r
 125                     DataSet target = (DataSet) object;\r
 126                     target.removeAllSequence();\r
 127                 } catch (java.lang.Exception ex) {\r
 128                     throw new IllegalStateException(ex.toString());\r
 129                 }\r
 130             }\r
 131             public java.lang.Object newInstance(java.lang.Object parent) {\r
 132                 return new uk.ac.vamsas.objects.core.Sequence();\r
 133             }\r
 134         };\r
 135         desc.setHandler(handler);\r
 136         desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");\r
 137         desc.setRequired(true);\r
 138         desc.setMultivalued(true);\r
 139         addFieldDescriptor(desc);\r
 140         \r
 141         //-- validation code for: _sequenceList\r
 142         fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
 143         fieldValidator.setMinOccurs(1);\r
 144         { //-- local scope\r
 145         }\r
 146         desc.setValidator(fieldValidator);\r
 147         //-- _sequenceMappingList\r
 148         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(uk.ac.vamsas.objects.core.SequenceMapping.class, "_sequenceMappingList", "sequenceMapping", org.exolab.castor.xml.NodeType.Element);\r
 149         handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
 150             public java.lang.Object getValue( java.lang.Object object ) \r
 151                 throws IllegalStateException\r
 152             {\r
 153                 DataSet target = (DataSet) object;\r
 154                 return target.getSequenceMapping();\r
 155             }\r
 156             public void setValue( java.lang.Object object, java.lang.Object value) \r
 157                 throws IllegalStateException, IllegalArgumentException\r
 158             {\r
 159                 try {\r
 160                     DataSet target = (DataSet) object;\r
 161                     target.addSequenceMapping( (uk.ac.vamsas.objects.core.SequenceMapping) value);\r
 162                 } catch (java.lang.Exception ex) {\r
 163                     throw new IllegalStateException(ex.toString());\r
 164                 }\r
 165             }\r
 166             public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {\r
 167                 try {\r
 168                     DataSet target = (DataSet) object;\r
 169                     target.removeAllSequenceMapping();\r
 170                 } catch (java.lang.Exception ex) {\r
 171                     throw new IllegalStateException(ex.toString());\r
 172                 }\r
 173             }\r
 174             public java.lang.Object newInstance(java.lang.Object parent) {\r
 175                 return new uk.ac.vamsas.objects.core.SequenceMapping();\r
 176             }\r
 177         };\r
 178         desc.setHandler(handler);\r
 179         desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");\r
 180         desc.setMultivalued(true);\r
 181         addFieldDescriptor(desc);\r
 182         \r
 183         //-- validation code for: _sequenceMappingList\r
 184         fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
 185         fieldValidator.setMinOccurs(0);\r
 186         { //-- local scope\r
 187         }\r
 188         desc.setValidator(fieldValidator);\r
 189         //-- _dataSetAnnotationsList\r
 190         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(uk.ac.vamsas.objects.core.DataSetAnnotations.class, "_dataSetAnnotationsList", "DataSetAnnotations", org.exolab.castor.xml.NodeType.Element);\r
 191         handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
 192             public java.lang.Object getValue( java.lang.Object object ) \r
 193                 throws IllegalStateException\r
 194             {\r
 195                 DataSet target = (DataSet) object;\r
 196                 return target.getDataSetAnnotations();\r
 197             }\r
 198             public void setValue( java.lang.Object object, java.lang.Object value) \r
 199                 throws IllegalStateException, IllegalArgumentException\r
 200             {\r
 201                 try {\r
 202                     DataSet target = (DataSet) object;\r
 203                     target.addDataSetAnnotations( (uk.ac.vamsas.objects.core.DataSetAnnotations) value);\r
 204                 } catch (java.lang.Exception ex) {\r
 205                     throw new IllegalStateException(ex.toString());\r
 206                 }\r
 207             }\r
 208             public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {\r
 209                 try {\r
 210                     DataSet target = (DataSet) object;\r
 211                     target.removeAllDataSetAnnotations();\r
 212                 } catch (java.lang.Exception ex) {\r
 213                     throw new IllegalStateException(ex.toString());\r
 214                 }\r
 215             }\r
 216             public java.lang.Object newInstance(java.lang.Object parent) {\r
 217                 return new uk.ac.vamsas.objects.core.DataSetAnnotations();\r
 218             }\r
 219         };\r
 220         desc.setHandler(handler);\r
 221         desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");\r
 222         desc.setMultivalued(true);\r
 223         addFieldDescriptor(desc);\r
 224         \r
 225         //-- validation code for: _dataSetAnnotationsList\r
 226         fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
 227         fieldValidator.setMinOccurs(0);\r
 228         { //-- local scope\r
 229         }\r
 230         desc.setValidator(fieldValidator);\r
 231         //-- _alignmentList\r
 232         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(uk.ac.vamsas.objects.core.Alignment.class, "_alignmentList", "Alignment", org.exolab.castor.xml.NodeType.Element);\r
 233         handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
 234             public java.lang.Object getValue( java.lang.Object object ) \r
 235                 throws IllegalStateException\r
 236             {\r
 237                 DataSet target = (DataSet) object;\r
 238                 return target.getAlignment();\r
 239             }\r
 240             public void setValue( java.lang.Object object, java.lang.Object value) \r
 241                 throws IllegalStateException, IllegalArgumentException\r
 242             {\r
 243                 try {\r
 244                     DataSet target = (DataSet) object;\r
 245                     target.addAlignment( (uk.ac.vamsas.objects.core.Alignment) value);\r
 246                 } catch (java.lang.Exception ex) {\r
 247                     throw new IllegalStateException(ex.toString());\r
 248                 }\r
 249             }\r
 250             public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {\r
 251                 try {\r
 252                     DataSet target = (DataSet) object;\r
 253                     target.removeAllAlignment();\r
 254                 } catch (java.lang.Exception ex) {\r
 255                     throw new IllegalStateException(ex.toString());\r
 256                 }\r
 257             }\r
 258             public java.lang.Object newInstance(java.lang.Object parent) {\r
 259                 return new uk.ac.vamsas.objects.core.Alignment();\r
 260             }\r
 261         };\r
 262         desc.setHandler(handler);\r
 263         desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");\r
 264         desc.setMultivalued(true);\r
 265         addFieldDescriptor(desc);\r
 266         \r
 267         //-- validation code for: _alignmentList\r
 268         fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
 269         fieldValidator.setMinOccurs(0);\r
 270         { //-- local scope\r
 271         }\r
 272         desc.setValidator(fieldValidator);\r
 273         //-- _treeList\r
 274         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(uk.ac.vamsas.objects.core.Tree.class, "_treeList", "Tree", org.exolab.castor.xml.NodeType.Element);\r
 275         handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
 276             public java.lang.Object getValue( java.lang.Object object ) \r
 277                 throws IllegalStateException\r
 278             {\r
 279                 DataSet target = (DataSet) object;\r
 280                 return target.getTree();\r
 281             }\r
 282             public void setValue( java.lang.Object object, java.lang.Object value) \r
 283                 throws IllegalStateException, IllegalArgumentException\r
 284             {\r
 285                 try {\r
 286                     DataSet target = (DataSet) object;\r
 287                     target.addTree( (uk.ac.vamsas.objects.core.Tree) value);\r
 288                 } catch (java.lang.Exception ex) {\r
 289                     throw new IllegalStateException(ex.toString());\r
 290                 }\r
 291             }\r
 292             public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {\r
 293                 try {\r
 294                     DataSet target = (DataSet) object;\r
 295                     target.removeAllTree();\r
 296                 } catch (java.lang.Exception ex) {\r
 297                     throw new IllegalStateException(ex.toString());\r
 298                 }\r
 299             }\r
 300             public java.lang.Object newInstance(java.lang.Object parent) {\r
 301                 return new uk.ac.vamsas.objects.core.Tree();\r
 302             }\r
 303         };\r
 304         desc.setHandler(handler);\r
 305         desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");\r
 306         desc.setMultivalued(true);\r
 307         addFieldDescriptor(desc);\r
 308         \r
 309         //-- validation code for: _treeList\r
 310         fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
 311         fieldValidator.setMinOccurs(0);\r
 312         { //-- local scope\r
 313         }\r
 314         desc.setValidator(fieldValidator);\r
 315         //-- _provenance\r
 316         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(uk.ac.vamsas.objects.core.Provenance.class, "_provenance", "Provenance", org.exolab.castor.xml.NodeType.Element);\r
 317         handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
 318             public java.lang.Object getValue( java.lang.Object object ) \r
 319                 throws IllegalStateException\r
 320             {\r
 321                 DataSet target = (DataSet) object;\r
 322                 return target.getProvenance();\r
 323             }\r
 324             public void setValue( java.lang.Object object, java.lang.Object value) \r
 325                 throws IllegalStateException, IllegalArgumentException\r
 326             {\r
 327                 try {\r
 328                     DataSet target = (DataSet) object;\r
 329                     target.setProvenance( (uk.ac.vamsas.objects.core.Provenance) value);\r
 330                 } catch (java.lang.Exception ex) {\r
 331                     throw new IllegalStateException(ex.toString());\r
 332                 }\r
 333             }\r
 334             public java.lang.Object newInstance(java.lang.Object parent) {\r
 335                 return new uk.ac.vamsas.objects.core.Provenance();\r
 336             }\r
 337         };\r
 338         desc.setHandler(handler);\r
 339         desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");\r
 340         desc.setRequired(true);\r
 341         desc.setMultivalued(false);\r
 342         addFieldDescriptor(desc);\r
 343         \r
 344         //-- validation code for: _provenance\r
 345         fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
 346         fieldValidator.setMinOccurs(1);\r
 347         { //-- local scope\r
 348         }\r
 349         desc.setValidator(fieldValidator);\r
 350     }\r
 351 \r
 352 \r
 353       //-----------/\r
 354      //- Methods -/\r
 355     //-----------/\r
 356 \r
 357     /**\r
 358      * Method getAccessMode.\r
 359      * \r
 360      * @return the access mode specified for this class.\r
 361      */\r
 362     public org.exolab.castor.mapping.AccessMode getAccessMode(\r
 363     ) {\r
 364         return null;\r
 365     }\r
 366 \r
 367     /**\r
 368      * Method getIdentity.\r
 369      * \r
 370      * @return the identity field, null if this class has no\r
 371      * identity.\r
 372      */\r
 373     public org.exolab.castor.mapping.FieldDescriptor getIdentity(\r
 374     ) {\r
 375         return super.getIdentity();\r
 376     }\r
 377 \r
 378     /**\r
 379      * Method getJavaClass.\r
 380      * \r
 381      * @return the Java class represented by this descriptor.\r
 382      */\r
 383     public java.lang.Class getJavaClass(\r
 384     ) {\r
 385         return uk.ac.vamsas.objects.core.DataSet.class;\r
 386     }\r
 387 \r
 388     /**\r
 389      * Method getNameSpacePrefix.\r
 390      * \r
 391      * @return the namespace prefix to use when marshaling as XML.\r
 392      */\r
 393     public java.lang.String getNameSpacePrefix(\r
 394     ) {\r
 395         return _nsPrefix;\r
 396     }\r
 397 \r
 398     /**\r
 399      * Method getNameSpaceURI.\r
 400      * \r
 401      * @return the namespace URI used when marshaling and\r
 402      * unmarshaling as XML.\r
 403      */\r
 404     public java.lang.String getNameSpaceURI(\r
 405     ) {\r
 406         return _nsURI;\r
 407     }\r
 408 \r
 409     /**\r
 410      * Method getValidator.\r
 411      * \r
 412      * @return a specific validator for the class described by this\r
 413      * ClassDescriptor.\r
 414      */\r
 415     public org.exolab.castor.xml.TypeValidator getValidator(\r
 416     ) {\r
 417         return this;\r
 418     }\r
 419 \r
 420     /**\r
 421      * Method getXMLName.\r
 422      * \r
 423      * @return the XML Name for the Class being described.\r
 424      */\r
 425     public java.lang.String getXMLName(\r
 426     ) {\r
 427         return _xmlName;\r
 428     }\r
 429 \r
 430     /**\r
 431      * Method isElementDefinition.\r
 432      * \r
 433      * @return true if XML schema definition of this Class is that\r
 434      * of a global\r
 435      * element or element with anonymous type definition.\r
 436      */\r
 437     public boolean isElementDefinition(\r
 438     ) {\r
 439         return _elementDefinition;\r
 440     }\r
 441 \r
 442 }\r