2 * This file is part of the Vamsas Client version 0.1.
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3 * Copyright 2009 by Jim Procter, Iain Milne, Pierre Marguerite,
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4 * Andrew Waterhouse and Dominik Lindner.
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6 * Earlier versions have also been incorporated into Jalview version 2.4
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7 * since 2008, and TOPALi version 2 since 2007.
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9 * The Vamsas Client is free software: you can redistribute it and/or modify
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10 * it under the terms of the GNU Lesser General Public License as published by
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11 * the Free Software Foundation, either version 3 of the License, or
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12 * (at your option) any later version.
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14 * The Vamsas Client is distributed in the hope that it will be useful,
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15 * but WITHOUT ANY WARRANTY; without even the implied warranty of
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16 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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17 * GNU Lesser General Public License for more details.
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19 * You should have received a copy of the GNU Lesser General Public License
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20 * along with the Vamsas Client. If not, see <http://www.gnu.org/licenses/>.
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22 package uk.ac.vamsas.objects.core.descriptors;
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24 //---------------------------------/
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25 //- Imported classes and packages -/
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26 //---------------------------------/
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28 import uk.ac.vamsas.objects.core.NodeType;
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31 * Class NodeTypeDescriptor.
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33 * @version $Revision$ $Date$
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35 public class NodeTypeDescriptor extends
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36 org.exolab.castor.xml.util.XMLClassDescriptorImpl {
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38 // --------------------------/
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39 // - Class/Member Variables -/
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40 // --------------------------/
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43 * Field _elementDefinition.
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45 private boolean _elementDefinition;
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50 private java.lang.String _nsPrefix;
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55 private java.lang.String _nsURI;
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60 private java.lang.String _xmlName;
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62 // ----------------/
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63 // - Constructors -/
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64 // ----------------/
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66 public NodeTypeDescriptor() {
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68 _nsURI = "http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes";
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69 _xmlName = "nodeType";
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70 _elementDefinition = false;
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72 // -- set grouping compositor
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73 setCompositorAsSequence();
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74 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
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75 org.exolab.castor.mapping.FieldHandler handler = null;
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76 org.exolab.castor.xml.FieldValidator fieldValidator = null;
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77 // -- initialize attribute descriptors
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80 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
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81 java.lang.String.class, "_id", "id",
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82 org.exolab.castor.xml.NodeType.Attribute);
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83 super.setIdentity(desc);
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84 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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85 public java.lang.Object getValue(java.lang.Object object)
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86 throws IllegalStateException {
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87 NodeType target = (NodeType) object;
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88 return target.getId();
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91 public void setValue(java.lang.Object object, java.lang.Object value)
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92 throws IllegalStateException, IllegalArgumentException {
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94 NodeType target = (NodeType) object;
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95 target.setId((java.lang.String) value);
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96 } catch (java.lang.Exception ex) {
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97 throw new IllegalStateException(ex.toString());
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101 public java.lang.Object newInstance(java.lang.Object parent) {
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102 return new java.lang.String();
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105 desc.setHandler(handler);
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106 desc.setMultivalued(false);
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107 addFieldDescriptor(desc);
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109 // -- validation code for: _id
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110 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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111 { // -- local scope
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112 org.exolab.castor.xml.validators.IdValidator typeValidator;
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113 typeValidator = new org.exolab.castor.xml.validators.IdValidator();
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114 fieldValidator.setValidator(typeValidator);
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116 desc.setValidator(fieldValidator);
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118 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
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119 java.lang.String.class, "_modifiable", "modifiable",
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120 org.exolab.castor.xml.NodeType.Attribute);
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121 desc.setImmutable(true);
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122 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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123 public java.lang.Object getValue(java.lang.Object object)
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124 throws IllegalStateException {
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125 NodeType target = (NodeType) object;
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126 return target.getModifiable();
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129 public void setValue(java.lang.Object object, java.lang.Object value)
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130 throws IllegalStateException, IllegalArgumentException {
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132 NodeType target = (NodeType) object;
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133 target.setModifiable((java.lang.String) value);
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134 } catch (java.lang.Exception ex) {
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135 throw new IllegalStateException(ex.toString());
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139 public java.lang.Object newInstance(java.lang.Object parent) {
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143 desc.setHandler(handler);
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144 desc.setMultivalued(false);
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145 addFieldDescriptor(desc);
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147 // -- validation code for: _modifiable
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148 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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149 { // -- local scope
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150 org.exolab.castor.xml.validators.StringValidator typeValidator;
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151 typeValidator = new org.exolab.castor.xml.validators.StringValidator();
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152 fieldValidator.setValidator(typeValidator);
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153 typeValidator.setWhiteSpace("preserve");
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155 desc.setValidator(fieldValidator);
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156 // -- initialize element descriptors
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159 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
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160 java.lang.String.class, "_name", "name",
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161 org.exolab.castor.xml.NodeType.Element);
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162 desc.setImmutable(true);
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163 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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164 public java.lang.Object getValue(java.lang.Object object)
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165 throws IllegalStateException {
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166 NodeType target = (NodeType) object;
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167 return target.getName();
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170 public void setValue(java.lang.Object object, java.lang.Object value)
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171 throws IllegalStateException, IllegalArgumentException {
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173 NodeType target = (NodeType) object;
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174 target.setName((java.lang.String) value);
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175 } catch (java.lang.Exception ex) {
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176 throw new IllegalStateException(ex.toString());
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180 public java.lang.Object newInstance(java.lang.Object parent) {
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184 desc.setHandler(handler);
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185 desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");
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186 desc.setMultivalued(false);
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187 addFieldDescriptor(desc);
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189 // -- validation code for: _name
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190 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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191 { // -- local scope
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192 org.exolab.castor.xml.validators.StringValidator typeValidator;
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193 typeValidator = new org.exolab.castor.xml.validators.StringValidator();
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194 fieldValidator.setValidator(typeValidator);
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195 typeValidator.setWhiteSpace("preserve");
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197 desc.setValidator(fieldValidator);
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199 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
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200 java.lang.String.class, "_description", "description",
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201 org.exolab.castor.xml.NodeType.Element);
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202 desc.setImmutable(true);
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203 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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204 public java.lang.Object getValue(java.lang.Object object)
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205 throws IllegalStateException {
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206 NodeType target = (NodeType) object;
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207 return target.getDescription();
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210 public void setValue(java.lang.Object object, java.lang.Object value)
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211 throws IllegalStateException, IllegalArgumentException {
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213 NodeType target = (NodeType) object;
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214 target.setDescription((java.lang.String) value);
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215 } catch (java.lang.Exception ex) {
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216 throw new IllegalStateException(ex.toString());
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220 public java.lang.Object newInstance(java.lang.Object parent) {
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224 desc.setHandler(handler);
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225 desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");
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226 desc.setMultivalued(false);
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227 addFieldDescriptor(desc);
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229 // -- validation code for: _description
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230 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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231 { // -- local scope
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232 org.exolab.castor.xml.validators.StringValidator typeValidator;
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233 typeValidator = new org.exolab.castor.xml.validators.StringValidator();
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234 fieldValidator.setValidator(typeValidator);
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235 typeValidator.setWhiteSpace("preserve");
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237 desc.setValidator(fieldValidator);
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239 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
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240 uk.ac.vamsas.objects.core.Vref.class, "_vrefList", "vref",
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241 org.exolab.castor.xml.NodeType.Element);
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242 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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243 public java.lang.Object getValue(java.lang.Object object)
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244 throws IllegalStateException {
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245 NodeType target = (NodeType) object;
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246 return target.getVref();
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249 public void setValue(java.lang.Object object, java.lang.Object value)
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250 throws IllegalStateException, IllegalArgumentException {
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252 NodeType target = (NodeType) object;
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253 target.addVref((uk.ac.vamsas.objects.core.Vref) value);
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254 } catch (java.lang.Exception ex) {
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255 throw new IllegalStateException(ex.toString());
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259 public void resetValue(Object object) throws IllegalStateException,
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260 IllegalArgumentException {
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262 NodeType target = (NodeType) object;
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263 target.removeAllVref();
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264 } catch (java.lang.Exception ex) {
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265 throw new IllegalStateException(ex.toString());
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269 public java.lang.Object newInstance(java.lang.Object parent) {
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270 return new uk.ac.vamsas.objects.core.Vref();
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273 desc.setHandler(handler);
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274 desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");
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275 desc.setMultivalued(true);
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276 addFieldDescriptor(desc);
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278 // -- validation code for: _vrefList
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279 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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280 fieldValidator.setMinOccurs(0);
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281 { // -- local scope
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283 desc.setValidator(fieldValidator);
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284 // -- _propertyList
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285 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
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286 uk.ac.vamsas.objects.core.Property.class, "_propertyList", "property",
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287 org.exolab.castor.xml.NodeType.Element);
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288 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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289 public java.lang.Object getValue(java.lang.Object object)
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290 throws IllegalStateException {
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291 NodeType target = (NodeType) object;
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292 return target.getProperty();
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295 public void setValue(java.lang.Object object, java.lang.Object value)
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296 throws IllegalStateException, IllegalArgumentException {
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298 NodeType target = (NodeType) object;
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299 target.addProperty((uk.ac.vamsas.objects.core.Property) value);
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300 } catch (java.lang.Exception ex) {
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301 throw new IllegalStateException(ex.toString());
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305 public void resetValue(Object object) throws IllegalStateException,
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306 IllegalArgumentException {
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308 NodeType target = (NodeType) object;
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309 target.removeAllProperty();
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310 } catch (java.lang.Exception ex) {
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311 throw new IllegalStateException(ex.toString());
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315 public java.lang.Object newInstance(java.lang.Object parent) {
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316 return new uk.ac.vamsas.objects.core.Property();
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319 desc.setHandler(handler);
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320 desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");
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321 desc.setMultivalued(true);
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322 addFieldDescriptor(desc);
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324 // -- validation code for: _propertyList
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325 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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326 fieldValidator.setMinOccurs(0);
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327 { // -- local scope
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329 desc.setValidator(fieldValidator);
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337 * Method getAccessMode.
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339 * @return the access mode specified for this class.
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341 public org.exolab.castor.mapping.AccessMode getAccessMode() {
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346 * Method getIdentity.
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348 * @return the identity field, null if this class has no identity.
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350 public org.exolab.castor.mapping.FieldDescriptor getIdentity() {
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351 return super.getIdentity();
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355 * Method getJavaClass.
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357 * @return the Java class represented by this descriptor.
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359 public java.lang.Class getJavaClass() {
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360 return uk.ac.vamsas.objects.core.NodeType.class;
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364 * Method getNameSpacePrefix.
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366 * @return the namespace prefix to use when marshaling as XML.
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368 public java.lang.String getNameSpacePrefix() {
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373 * Method getNameSpaceURI.
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375 * @return the namespace URI used when marshaling and unmarshaling as XML.
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377 public java.lang.String getNameSpaceURI() {
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382 * Method getValidator.
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384 * @return a specific validator for the class described by this
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387 public org.exolab.castor.xml.TypeValidator getValidator() {
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392 * Method getXMLName.
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394 * @return the XML Name for the Class being described.
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396 public java.lang.String getXMLName() {
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401 * Method isElementDefinition.
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403 * @return true if XML schema definition of this Class is that of a global
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404 * element or element with anonymous type definition.
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406 public boolean isElementDefinition() {
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407 return _elementDefinition;
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