2 // FORESTER -- software libraries and applications
3 // for evolutionary biology research and applications.
5 // Copyright (C) 2008-2009 Christian M. Zmasek
6 // Copyright (C) 2008-2009 Burnham Institute for Medical Research
9 // This library is free software; you can redistribute it and/or
10 // modify it under the terms of the GNU Lesser General Public
11 // License as published by the Free Software Foundation; either
12 // version 2.1 of the License, or (at your option) any later version.
14 // This library is distributed in the hope that it will be useful,
15 // but WITHOUT ANY WARRANTY; without even the implied warranty of
16 // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
17 // Lesser General Public License for more details.
19 // You should have received a copy of the GNU Lesser General Public
20 // License along with this library; if not, write to the Free Software
21 // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
23 // Contact: phylosoft @ gmail . com
24 // WWW: https://sites.google.com/site/cmzmasek/home/software/forester
26 package org.forester.io.parsers.nexus;
28 public final class NexusConstants {
30 public final static String NEXUS = "#NEXUS";
31 public final static String BEGIN_TAXA = "Begin Taxa;";
32 public final static String BEGIN_TREES = "Begin Trees;";
33 public final static String TREE = "Tree";
34 public final static String DIMENSIONS = "Dimensions";
35 public final static String NTAX = "NTax";
36 public final static String NCHAR = "NChar";
37 public final static String TAXLABELS = "TaxLabels";
38 public final static String CHARSTATELABELS = "CharStateLabels";
39 public final static String END = "End;";
40 public final static String MATRIX = "Matrix";
41 public final static String BEGIN_CHARACTERS = "Begin Characters;";
42 public final static String BEGIN_DATA = "Begin Data;";
43 public final static String FORMAT = "Format";
44 public final static String DATATYPE = "DataType";
45 public final static String STANDARD = "Standard";
46 public final static String SYMBOLS = "Symbols";
47 public static final String TRANSLATE = "Translate";
48 public static final String UTREE = "UTREE";